RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 RTBDNQ9BSG5 229 aaPredicted RBP2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM243Q9BU79 118 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 SFXN3Q9BWM7 321 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 MROQ9BYG7 248 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 SAMD10Q9BYL1 202 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 DMAC2Q9NW81 257 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 TAS2R5Q9NYW4 299 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 PCYOX1Q9UHG3 505 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 DKKL1Q9UK85 242 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 CLUHO75153 1309 aa2.39□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNFX1Q9P2E3 1918 aaKnown RBP2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 TRAV8-2A0A0B4J237 113 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF878C9JN71 531 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 H3BP45 60 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 I3L4J1 428 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 FFAR1O14842 300 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 CCDC22O60826 627 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 SS18L1O75177 396 aaPredicted RBP2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 MED6O75586 246 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 GCM2O75603 506 aaPredicted RBP2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 CA2P00918 260 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 BGLAPP02818 100 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 FABP3P05413 133 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 MIPP30301 263 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 RCVRNP35243 200 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 PSMB2P49721 201 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 MNAT1P51948 309 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 CRYBA4P53673 196 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 SYNJ2BPP57105 145 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 LINC00315P59091 139 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 C1QTNF8P60827 252 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 SPCS3P61009 180 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 UBE2NP61088 152 aaKnown RBP2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 POU6F1Q14863 301 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 PTPRKQ15262 1439 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 RSU1Q15404 277 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 Q499Y3 187 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 SPATA31B1PQ5VZV4 182 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 SPNS3Q6ZMD2 512 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 H2AFVQ71UI9 128 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 OR51D1Q8NGF3 324 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 OR1L8Q8NGR8 309 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 Q8WTZ3 238 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 CYGBQ8WWM9 190 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM159Q96B96 161 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 C18orf15Q96N68 181 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 PHB2Q99623 299 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 MED18Q9BUE0 208 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC25A2Q9BXI2 301 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 IFI27L2Q9H2X8 130 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 CDC42EP4Q9H3Q1 356 aaKnown RBP2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 RBM12B-AS1Q9P1G2 102 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 HHLA2Q9UM44 414 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 POLR1DQ9Y2S0 133 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 HES2Q9Y543 173 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 MYO10Q9HD67 2058 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 NFASCO94856 1347 aa2.38□□□□□ -2.03
SMARCA1-204ENST00000478420 A0A087WUJ7 227 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 IGHV6-1A0A0B4J1U7 121 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF324O75467 553 aaPredicted RBP2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 SUPT3HO75486 399 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 LINC00614P0C842 121 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 ALDH3A1P30838 453 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 APLNRP35414 380 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 CXCL5P42830 114 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 ACOT2P49753 483 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 RAB4BP61018 213 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 RAB5BP61020 215 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 RPL23P62829 140 aaKnown RBP2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC35A2P78381 396 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 EDDM3AQ14507 147 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 GINS1Q14691 196 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM183BQ1AE95 376 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 FBXL19-AS1Q494R0 122 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM97Q5BJF2 176 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 ACSBG2Q5FVE4 666 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TRIQKQ629K1 86 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM215Q68D42 235 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC36A1Q7Z2H8 476 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 GLT6D1Q7Z4J2 308 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM144Q7Z5S9 345 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 PRNTQ86SH4 94 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TMEM183AQ8IXX5 376 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC26A10Q8NG04 563 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 OR2Z1Q8NG97 314 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 OR10D3Q8NH80 312 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC35B4Q969S0 331 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 FXYD5Q96DB9 178 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 KCNS1Q96KK3 526 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 RNF157Q96PX1 679 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 OR2V2Q96R30 315 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC25A31Q9H0C2 315 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 PCBD2Q9H0N5 130 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 TXNIPQ9H3M7 391 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms