RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CHPT1Q8WUD6 406 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 TMEM106AQ96A25 262 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 LINC00574Q9H8X3 128 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 TMEM138Q9NPI0 162 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 MRPS18AQ9NVS2 196 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 IL36GQ9NZH8 169 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 ZMAT5Q9UDW3 170 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 ZNF281Q9Y2X9 895 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 OR7C1O76099 320 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 HTR3BO95264 441 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 GZMHP20718 246 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 DCKP27707 260 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 GDNFP39905 211 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 SOX2P48431 317 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 GPR176Q14439 515 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 NHLRC3Q5JS37 347 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 FOXB2Q5VYV0 432 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 FOXRED2Q8IWF2 684 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 STX19Q8N4C7 294 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 OR52I1Q8NGK6 324 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 OR13A1Q8NGR1 328 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 OR56B4Q8NH76 319 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 MCRIP2Q9BUT9 160 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 DPCDQ9BVM2 203 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 GON7Q9BXV9 100 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 IFT22Q9H7X7 185 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 AMBNQ9NP70 447 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 CHCHD3Q9NX63 227 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 TAS2R4Q9NYW5 299 aa11.51□□□□□ -0.57
SMARCE1-209ENST00000478349 TRAV24A0A0B4J272 114 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 SNRNP70P08621 437 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 IGLL1P15814 213 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 ZNF93P35789 620 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 RBM11P57052 281 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 RIPK1Q13546 671 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 MPV17LQ2QL34 196 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 TMEM30BQ3MIR4 351 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 DDI2Q5TDH0 399 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 RSBN1Q5VWQ0 802 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 ZNF529Q6P280 563 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 PQLC1Q8N2U9 271 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 Q8NFD4 153 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 OR51A2Q8NGJ7 313 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 NEK7Q8TDX7 302 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 SMPD3Q9NY59 655 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 ST3GAL6Q9Y274 331 aa11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A18PA6NE21 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A16PA6NEW6 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A20PA6NIJ5 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 SERPINE3A8MV23 424 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A12PA8MX19 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A5PA8MXJ8 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 E9PI62 339 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 HSD17B6O14756 317 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 GAPDHP04406 335 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A15PP0C7V4 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A13PP0C7W8 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A14PP0C7W9 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FAM90A24PP0C7X0 464 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 CGB3P0DN86 165 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 CGB7P0DN87 165 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 GTF2F2P13984 249 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 BDKRB2P30411 391 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 GNG10P50151 68 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 LTC4SQ16873 150 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 PIGYQ3MUY2 71 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 ASCL4Q6XD76 172 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 DRAM1Q8N682 238 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 SUMF2Q8NBJ7 301 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 OR52M1Q8NGK5 317 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 OR52N1Q8NH53 320 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 SMIM19Q96E16 107 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 FGF20Q9NP95 211 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 ZFP57Q9NU63 452 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 AASSQ9UDR5 926 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 ING4Q9UNL4 249 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 EXOSC1Q9Y3B2 195 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 CMYA5Q8N3K9 4069 aa11.49□□□□□ -0.57
SMARCE1-209ENST00000478349 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 NUDT19A8MXV4 375 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 CCRL2O00421 344 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 TXNL1O43396 289 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 AMY1AP04745 511 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 AMY2AP04746 511 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 LIMS3P0CW19 117 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 LIMS4P0CW20 117 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 SSTR5P35346 364 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 Q3ZCU0 254 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 ATAD3CQ5T2N8 411 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms