RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
HMGA1-206ENST00000478214 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
HMGA1-206ENST00000478214 GABRA5P31644 462 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 RAG2P55895 527 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 SSX2Q16385 188 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 LY6EQ16553 131 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 PLA1AQ53H76 456 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 C1orf100Q5SVJ3 147 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 UTF1Q5T230 341 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 OR52W1Q6IF63 320 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 OR10K2Q6IF99 312 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 GDPGP1Q6ZNW5 385 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 ABHD12Q8N2K0 398 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 ZNF565Q8N9K5 539 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 MRGPRDQ8TDS7 321 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 FAM46BQ96A09 425 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 Q96M66 194 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 SLITRK2Q9H156 845 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 CALYQ9NYX4 217 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 RCC2Q9P258 522 aaKnown RBP12.62□□□□□ -0.39
HMGA1-206ENST00000478214 GHRLQ9UBU3 117 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 TMEM30CPA0ZSE6 113 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 ARL6IP5O75915 188 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 NDUFA7O95182 113 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 MPIG6BO95866 241 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 CD37P11049 281 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 RPL15P61313 204 aaKnown RBP12.61□□□□□ -0.39
HMGA1-206ENST00000478214 FAM189A2Q15884 450 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 AANATQ16613 207 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 MINOS1Q5TGZ0 78 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 SLC35E4Q6ICL7 350 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 SVOPQ8N4V2 548 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 OR4P4Q8NGL7 312 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 RFESDQ8TAC1 157 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 NDNFQ8TB73 568 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 PIFOQ8TCI5 191 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 MALSU1Q96EH3 234 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 KIRREL1Q96J84 757 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 CYYR1Q96J86 154 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 GFI1Q99684 422 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 YTHDF1Q9BYJ9 559 aaKnown RBP12.61□□□□□ -0.39
HMGA1-206ENST00000478214 KCNK15Q9H427 330 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 ZNF286AQ9HBT8 521 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 SPACA1Q9HBV2 294 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 AK6Q9Y3D8 172 aaKnown RBP12.61□□□□□ -0.39
HMGA1-206ENST00000478214 MINOS1-NBL1R4GNA1 71 aa12.61□□□□□ -0.39
HMGA1-206ENST00000478214 MCRIP1C9JLW8 97 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 SLC22A1O15245 554 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 IL1AP01583 271 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 UBBP0CG47 229 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 JUNBP17275 347 aaPredicted RBP12.6□□□□□ -0.39
HMGA1-206ENST00000478214 NFYBP25208 207 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
HMGA1-206ENST00000478214 HTR2CP28335 458 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 CD34P28906 385 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 SSTR5P35346 364 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 RAB13P51153 203 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 SIGIRRQ6IA17 410 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 DHRS7BQ6IAN0 325 aaPredicted RBP12.6□□□□□ -0.39
HMGA1-206ENST00000478214 RAB12Q6IQ22 244 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 RTN4RL2Q86UN3 420 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 OR4F5Q8NH21 305 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 CST11Q9H112 138 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 LINC00574Q9H8X3 128 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 LRRC42Q9Y546 428 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 HILPDAQ9Y5L2 63 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 PEX16Q9Y5Y5 336 aa12.6□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A10PA6NDY2 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A18PA6NE21 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A16PA6NEW6 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A20PA6NIJ5 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A7PA6NKC0 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 VGLL3A8MV65 326 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A22PA8MWA6 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A12PA8MX19 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A5PA8MXJ8 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A23PA8MXZ1 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 IGLV1-47P01700 117 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 MT-ND4P03905 459 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A15PP0C7V4 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A13PP0C7W8 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A14PP0C7W9 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A24PP0C7X0 464 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 HTR1DP28221 377 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 LTC4SQ16873 150 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 ZNF497Q6ZNH5 498 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 Q6ZSV7 163 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 OR6M1Q8NGM8 313 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 CCDC107Q8WV48 283 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 ZNF747Q9BV97 191 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 BEX1Q9HBH7 125 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 NDUFB11Q9NX14 153 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 IDI2-AS1Q9NZ38 188 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 MMP24Q9Y5R2 645 aa12.59□□□□□ -0.39
HMGA1-206ENST00000478214 A0A087X0M5 115 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms