RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CALYQ9NYX4 217 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 SIGLEC9Q9Y336 463 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 PNMA8CA0A1B0GUJ8 204 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 A0A1W2PPK0 400 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 LEUTXA8MZ59 168 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 LY6LH3BQJ8 138 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 BUB1B-PAK6H3BSN5 160 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 GEMIN2O14893 280 aaKnown RBP17.48■□□□□ 0.39
COL9A3-211ENST00000477612 GTF2F2P13984 249 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 JUNBP17275 347 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-211ENST00000477612 SERPINA2P20848 420 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 PRRX1P54821 245 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 MYDGFQ969H8 173 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 MND1Q9BWT6 205 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 SCN3BQ9NY72 215 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 ZNF581Q9P0T4 197 aa17.48■□□□□ 0.39
COL9A3-211ENST00000477612 LSM2Q9Y333 95 aaKnown RBP17.48■□□□□ 0.39
COL9A3-211ENST00000477612 A0A1W2PP11 408 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 OR7C1O76099 320 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-211ENST00000477612 IL1AP01583 271 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 MAPK3P27361 379 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-211ENST00000477612 SLC35A2P78381 396 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 IRF3Q14653 427 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 HERPUD1Q15011 391 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 SLC22A6Q4U2R8 563 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 SLC16A12Q6ZSM3 486 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 TMEM219Q86XT9 240 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 MS4A15Q8N5U1 240 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 OR9G1Q8NH87 305 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 CFHR4Q92496 578 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 MMP27Q9H306 513 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 IDI2-AS1Q9NZ38 188 aa17.47■□□□□ 0.39
COL9A3-211ENST00000477612 FAM172BPA6NC97 362 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 OOSP1A8MZH6 123 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 PTGES3LE9PB15 166 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 F2RL2O00254 374 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 TOR1AO14656 332 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 GZMHP20718 246 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 MYF6P23409 242 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 CEACAM3P40198 252 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 GLP1RP43220 463 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 GPR50Q13585 617 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 SPHARQ15513 63 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 UTF1Q5T230 341 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 C16orf82Q7Z2V1 217 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 NKAIN3Q8N8D7 197 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 MUL1Q969V5 352 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 DUSP21Q9H596 190 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 SERTAD4Q9NUC0 356 aa17.46■□□□□ 0.39
COL9A3-211ENST00000477612 RCC2Q9P258 522 aaKnown RBP17.46■□□□□ 0.39
COL9A3-211ENST00000477612 MRPS28Q9Y2Q9 187 aaKnown RBP17.46■□□□□ 0.39
COL9A3-211ENST00000477612 H0YHG0 523 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 H3BUI4 141 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 MAS1P04201 325 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 BRS3P32247 399 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 TPTE2P1Q5T6R2 138 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 GLIPR1L1Q6UWM5 242 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 JAGN1Q8N5M9 183 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 MRGPRDQ8TDS7 321 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 OR5M11Q96RB7 305 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 UQCC2Q9BRT2 126 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 ANKRD60Q9BZ19 345 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 PRSS22Q9GZN4 317 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 MMP28Q9H239 520 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 SPACA1Q9HBV2 294 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 MEGF8Q7Z7M0 2845 aa17.45■□□□□ 0.38
COL9A3-211ENST00000477612 J3QR06 171 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 SC5DO75845 299 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 NFYBP25208 207 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 GP2P55259 537 aaKnown RBP17.44■□□□□ 0.38
COL9A3-211ENST00000477612 ACSM3Q53FZ2 586 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 KLHDC1Q8N7A1 406 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 WIPF2Q8TF74 440 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-211ENST00000477612 SGCDQ92629 289 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 TPRKBQ9Y3C4 175 aa17.44■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A10PA6NDY2 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A18PA6NE21 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A16PA6NEW6 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A20PA6NIJ5 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A7PA6NKC0 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A12PA8MX19 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A5PA8MXJ8 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A23PA8MXZ1 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A15PP0C7V4 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A13PP0C7W8 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A14PP0C7W9 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A24PP0C7X0 464 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 CD37P11049 281 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 ARHGDIBP52566 201 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 AWAT2Q6E213 333 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 ZNF497Q6ZNH5 498 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 Q6ZTK2 550 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 GAPTQ8N292 157 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 WNT10AQ9GZT5 417 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 LIN7BQ9HAP6 207 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 GHRLQ9UBU3 117 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 PSG11Q9UQ72 335 aa17.43■□□□□ 0.38
COL9A3-211ENST00000477612 TMEM30CPA0ZSE6 113 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 C15orf65H3BRN8 121 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 ORC5O43913 435 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms