RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 OR56B1Q8NGI3 324 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 SUCNR1Q9BXA5 334 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 LPAR5Q9H1C0 372 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 RAB9BQ9NP90 201 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 SIRT7Q9NRC8 400 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 ETAA1Q9NY74 926 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 KIF25Q9UIL4 384 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 KIAA2026Q5HYC2 2103 aa10.76□□□□□ -0.69
TOP3A-205ENST00000477508 METTL21EPA6NDL7 271 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 CLPXO76031 633 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 IL1AP01583 271 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 CHATP28329 748 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 BLVRBP30043 206 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-205ENST00000477508 MXD1Q05195 221 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 SIGIRRQ6IA17 410 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 HEPN1Q6WQI6 88 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 RBMS3Q6XE24 437 aaKnown RBP10.75□□□□□ -0.69
TOP3A-205ENST00000477508 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 TCF23Q7RTU1 214 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 NR2C2APQ86WQ0 139 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 ANKRD13BQ86YJ7 626 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 C11orf42Q8N5U0 333 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 OR13D1Q8NGV5 346 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 TNFRSF14Q92956 283 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 JMJD8Q96S16 334 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 ZNF69Q9UC07 566 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 DAPK2Q9UIK4 370 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 HSF4Q9ULV5 492 aa10.75□□□□□ -0.69
TOP3A-205ENST00000477508 TMEM272A0A1B0GTI8 110 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 KBTBD11-OT1A0A1B0GTJ5 212 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 RNASEK-C17orf49H0YIS7 233 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 TCF21O43680 179 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 SCGNO76038 276 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 MT-ND4P03905 459 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 IGHV1-8P0DP01 117 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 RPL5P46777 297 aaKnown RBP10.74□□□□□ -0.69
TOP3A-205ENST00000477508 MIDNQ504T8 468 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 TRAT1Q6PIZ9 186 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 GAPTQ8N292 157 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 OR10A7Q8NGE5 316 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 PLPPR1Q8TBJ4 325 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 RIMS4Q9H426 269 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-205ENST00000477508 RNF167Q9H6Y7 350 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 LINC00574Q9H8X3 128 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 PLEKHJ1Q9NW61 149 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 ING3Q9NXR8 418 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 ZNF581Q9P0T4 197 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 SCOCQ9UIL1 159 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 ETV7Q9Y603 341 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 SESN1Q9Y6P5 492 aa10.74□□□□□ -0.69
TOP3A-205ENST00000477508 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 SMIM30A4D0T7 59 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 NPFFO15130 113 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 GABARAPO95166 117 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 CGB3P0DN86 165 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 CGB7P0DN87 165 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 SLC2A2P11168 524 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-205ENST00000477508 GLP1RP43220 463 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 VEGFCP49767 419 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 LSM3P62310 102 aaKnown RBP10.73□□□□□ -0.69
TOP3A-205ENST00000477508 ARL6IP1Q15041 203 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 NKAPLQ5M9Q1 402 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 C6orf183Q5T699 404 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 BRD3OSQ6XYD6 125 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 ZNF554Q86TJ5 538 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 SLC6A7Q99884 636 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 NICN1Q9BSH3 213 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 KCNK15Q9H427 330 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 ABRACLQ9P1F3 81 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 TRAPPC2LQ9UL33 140 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 FAM96BQ9Y3D0 163 aa10.73□□□□□ -0.69
TOP3A-205ENST00000477508 A0A0A6YYD4 124 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 MEX3AA1L020 520 aaKnown RBP10.72□□□□□ -0.69
TOP3A-205ENST00000477508 UBE2QL1A1L167 161 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 NPIPB11E5RHQ5 1161 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 SOCS1O15524 211 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 ORC5O43913 435 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 CLEC2LP0C7M8 214 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 CDK2P24941 298 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 RPS19P39019 145 aaKnown RBP10.72□□□□□ -0.69
TOP3A-205ENST00000477508 LGALS4P56470 323 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 TMEM30BQ3MIR4 351 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 IDNKQ5T6J7 187 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 GPR107Q5VW38 600 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 SLC16A12Q6ZSM3 486 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 Q6ZTK2 550 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 C6orf201Q7Z4U5 140 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 RTN4RL2Q86UN3 420 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 OR11H6Q8NGC7 330 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 OR13A1Q8NGR1 328 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 C22orf15Q8WYQ4 148 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 BCL7BQ9BQE9 202 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 SULT4A1Q9BR01 284 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 FAAP24Q9BTP7 215 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 TMEM133Q9H2Q1 129 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 PRDM13Q9H4Q3 707 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 CALYQ9NYX4 217 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 KCNIP1Q9NZI2 227 aa10.72□□□□□ -0.69
TOP3A-205ENST00000477508 MEIOCA2RUB1 952 aa10.71□□□□□ -0.69
TOP3A-205ENST00000477508 FOXI3A8MTJ6 420 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms