RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 GUSBP08236 651 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 GIMD1P0DJR0 217 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 CNTFRP26992 372 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 NUP62P37198 522 aaPredicted RBP1.31□□□□□ -2.2
TARDBP-208ENST00000477447 RAB38P57729 211 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 BASP1P80723 227 aaKnown RBP1.31□□□□□ -2.2
TARDBP-208ENST00000477447 CASP8Q14790 479 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 GOLGA7BQ2TAP0 167 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 NOXRED1Q6NXP6 359 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 FAM19A1Q7Z5A9 133 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 TCAIMQ8N3R3 496 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 ERMNQ8TAM6 284 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 OLFM3Q96PB7 478 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 KLF6Q99612 283 aaPredicted RBP1.31□□□□□ -2.2
TARDBP-208ENST00000477447 OR2D2Q9H210 308 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 TREM1Q9NP99 234 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 PRELID1Q9Y255 219 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 NUP205Q92621 2012 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 UNC13AQ9UPW8 1703 aa1.31□□□□□ -2.2
TARDBP-208ENST00000477447 MGAT4DA6NG13 374 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 OR5H14A6NHG9 310 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 OR5K4A6NMS3 321 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 J3QKU1 62 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 PSMD11O00231 422 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 SULT1B1O43704 296 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 CDK14O94921 469 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 OR5F1O95221 314 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 IGKV5-2P06315 115 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 LCN1P31025 176 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 EVI2BP34910 448 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 BLVRAP53004 296 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 TPM4P67936 248 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 C2orf80Q0P641 193 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 TNXAQ16473 311 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 ELP2Q6IA86 826 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 COPS6Q7L5N1 327 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 LRRC6Q86X45 466 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 SYCE1Q8N0S2 351 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 GATD1Q8NB37 220 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 Q8NDZ9 215 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 OR4A5Q8NH83 315 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 MFSD8Q8NHS3 518 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 CDC26Q8NHZ8 85 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 ANGPTL6Q8NI99 470 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 LMX1AQ8TE12 382 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 PDCD6IPQ8WUM4 868 aaKnown RBP1.3□□□□□ -2.2
TARDBP-208ENST00000477447 ZMYND19Q96E35 227 aaPredicted RBP1.3□□□□□ -2.2
TARDBP-208ENST00000477447 CPB2Q96IY4 423 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 GLT1D1Q96MS3 346 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 CYTH2Q99418 400 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 ACBD6Q9BR61 282 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 BBS2Q9BXC9 721 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 OR52A5Q9H2C5 316 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 LRRC19Q9H756 370 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 BTRCQ9Y297 605 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 ATP6V1DQ9Y5K8 247 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 POLR3AO14802 1390 aaPredicted RBP1.3□□□□□ -2.2
TARDBP-208ENST00000477447 MIA3Q5JRA6 1907 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 NOS1P29475 1434 aa1.3□□□□□ -2.2
TARDBP-208ENST00000477447 TRBV24-1A0A075B6N3 115 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 A0A1B0GTI1 187 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 ERICH2A1L162 156 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 OVOL1O14753 267 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 SH2D1AO60880 128 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 NDUFS6O75380 124 aaKnown RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CRTAPO75718 401 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 BRI3O95415 125 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 OPN1SWP03999 348 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 RPSAP08865 295 aaKnown RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 SLC2A1P11166 492 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 GZMHP20718 246 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CSRP1P21291 193 aaKnown RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 DNASE1L1P49184 302 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 HBG1P69891 147 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 HBG2P69892 147 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 PSG4Q00888 419 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 DR1Q01658 176 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 RGS21Q2M5E4 152 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CEACAM21Q3KPI0 293 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 HBMQ6B0K9 141 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 ZNF322Q6U7Q0 402 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 LRRC34Q8IZ02 419 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 SPICQ8N5J4 248 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 FER1L6-AS1Q8NA97 138 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 OR4K17Q8NGC6 315 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 OR4K13Q8NH42 304 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 LGALS14Q8TCE9 139 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CASTOR1Q8WTX7 329 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CCDC12Q8WUD4 166 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CIDECQ96AQ7 238 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 CMBLQ96DG6 245 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 REEP6Q96HR9 211 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 TRNT1Q96Q11 434 aaKnown RBP1.29□□□□□ -2.2
TARDBP-208ENST00000477447 PITX2Q99697 317 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 C9orf16Q9BUW7 83 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 HINT2Q9BX68 163 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 SPZ1Q9BXG8 430 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 POTEKPQ9BYX7 375 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 ARL6Q9H0F7 186 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms