RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 USF1P22415 310 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 RPL12P30050 165 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 CMPK1P30085 196 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 GRPRP30550 384 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 MDH2P40926 338 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 GPR6P46095 362 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZFP36L2P47974 494 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 AQP4P55087 323 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ARPP19P56211 112 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 CLDN6P56747 220 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TAS2R30P59541 319 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 RPL31P62899 125 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 SELENOWP63302 87 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 BTG2P78543 158 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 CD164Q04900 197 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 FMODQ06828 376 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 IL10RBQ08334 325 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF763Q0D2J5 394 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF154Q13106 437 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 FZD2Q14332 565 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 HERPUD1Q15011 391 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 EXOSC7Q15024 291 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 JOSD1Q15040 202 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 PAFAH1B3Q15102 231 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 TRMT5Q32P41 509 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 SLC25A52Q3SY17 297 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ACSF3Q4G176 576 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 ATP6AP1LQ52LC2 224 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 C10orf91Q5T1B1 145 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZFAND6Q6FIF0 208 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 MFSD12Q6NUT3 480 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SFXN4Q6P4A7 337 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SLC25A47Q6Q0C1 308 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 AGTRAPQ6RW13 159 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OPN5Q6U736 354 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TMEM184AQ6ZMB5 413 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ADAMTSL5Q6ZMM2 481 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SLC25A48Q6ZT89 311 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 RASSF6Q6ZTQ3 369 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 CHMP1BQ7LBR1 199 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PRSS48Q7RTY5 328 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ACOT1Q86TX2 421 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OAFQ86UD1 273 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TMEM139Q8IV31 216 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 CMTM1Q8IZ96 169 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF567Q8N184 647 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZADH2Q8N4Q0 377 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 MMGT1Q8N4V1 131 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 EID2Q8N6I1 236 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 RNF149Q8NC42 400 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF439Q8NDP4 499 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 BPIFB6Q8NFQ5 453 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 BEST4Q8NFU0 473 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR4S1Q8NGB4 309 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR11H4Q8NGC9 324 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR8D4Q8NGM9 314 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR1N2Q8NGR9 330 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR10R2Q8NGX6 335 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR2AJ1Q8NGZ0 328 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR2T4Q8NH00 348 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR5W2Q8NH69 310 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR5K2Q8NHB8 316 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ACER1Q8TDN7 264 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 VN1R17PQ8TDU5 208 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF418Q8TF45 676 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 RAB2BQ8WUD1 216 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TFB1MQ8WVM0 346 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 CRYGNQ8WXF5 182 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TMEM37Q8WXS4 190 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TADA1Q96BN2 335 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 RCN3Q96D15 328 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SDSLQ96GA7 329 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TIMD4Q96H15 378 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 BTF3L4Q96K17 158 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SLC35E1Q96K37 410 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 NEDD4LQ96PU5 975 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 RBP7Q96R05 134 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR6C1Q96RD1 312 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TP53RKQ96S44 253 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 GFI1Q99684 422 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ATP5SQ99766 215 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 NKX3-1Q99801 234 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 LXNQ9BS40 222 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PSMG3Q9BT73 122 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 EFCAB11Q9BUY7 163 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 FAIM2Q9BWQ8 316 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF436Q9C0F3 470 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 TMEM126AQ9H061 195 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 LPAR5Q9H1C0 372 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 MS4A6AQ9H2W1 248 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR51I1Q9H343 314 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 RETNQ9HD89 108 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ENY2Q9NPA8 101 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 A4GALTQ9NPC4 353 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SLC17A5Q9NRA2 495 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 UBQLN4Q9NRR5 601 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 MRPL16Q9NX20 251 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 SLC23A2Q9UGH3 650 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TRAPPC2LQ9UL33 140 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 HS3ST2Q9Y278 367 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms