RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 OR11H7Q8NGC8 314 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-206ENST00000477085 C5orf66Q9H5L9 145 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 MBNL3Q9NUK0 354 aaKnown RBP12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DNAJB11Q9UBS4 358 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4Q9UBX2 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 SPTBN1Q01082 2364 aaKnown RBP12.08□□□□□ -0.48
COL4A6-206ENST00000477085 PKDREJQ9NTG1 2253 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 FABP7O15540 132 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 PRAF2O60831 178 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 OR4E1P0C645 316 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TRAPPC2P0DI81 140 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TRAPPC2BP0DI82 140 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 CXCL3P19876 107 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 PI3P19957 117 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 GABRA2P47869 451 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 EIF2B2P49770 351 aaKnown RBP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 SRSF1Q07955 248 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 METTL11BQ5VVY1 283 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 STUMQ69YW2 141 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 SLC25A42Q86VD7 318 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TPRX1Q8N7U7 411 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 ZNRF1Q8ND25 227 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 EGLN1Q9GZT9 426 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 MYOZ1Q9NP98 299 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TMEM178BH3BS89 294 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 CCNKO75909 580 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 SOD3P08294 240 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 SELLP14151 372 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 NFYAP23511 347 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 FCGR2CP31995 323 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 GLIPR1P48060 266 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TEX36Q5VZQ5 186 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 ZNF626Q68DY1 528 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 SLC35E4Q6ICL7 350 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 C11orf71Q6IPW1 123 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TMEM17Q86X19 198 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 OR11L1Q8NGX0 322 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 CCL17Q92583 94 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 TMEM230Q96A57 120 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 KIF25Q9UIL4 384 aa12.07□□□□□ -0.48
COL4A6-206ENST00000477085 UBR5O95071 2799 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-206ENST00000477085 DYSFO75923 2080 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 COL12A1Q99715 3063 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 USP9XQ93008 2570 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-206ENST00000477085 GYPAP02724 150 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 DANCRP0C864 163 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 UBE2MP61081 183 aaKnown RBP12.06□□□□□ -0.48
COL4A6-206ENST00000477085 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
COL4A6-206ENST00000477085 ASCC1Q8N9N2 400 aaKnown RBP12.06□□□□□ -0.48
COL4A6-206ENST00000477085 UBALD1Q8TB05 177 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 FYTTD1Q96QD9 318 aaKnown RBP12.06□□□□□ -0.48
COL4A6-206ENST00000477085 DCTN5Q9BTE1 182 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 RANGRFQ9HD47 186 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-206ENST00000477085 SLC23A1Q9UHI7 598 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
COL4A6-206ENST00000477085 MEX3AA1L020 520 aaKnown RBP12.05□□□□□ -0.48
COL4A6-206ENST00000477085 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 SNRPGP15A8MWD9 76 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 BET1O15155 118 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 AADACP22760 399 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 ZBTB25P24278 435 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 FPR2P25090 351 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 SNRPD2P62316 118 aaKnown RBP12.05□□□□□ -0.48
COL4A6-206ENST00000477085 HLA-DRB3P79483 266 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 CD83Q01151 205 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 PPP1R1AQ13522 171 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 C2orf68Q2NKX9 166 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 CD276Q5ZPR3 534 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 LDLRAD3Q86YD5 345 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 DACT3Q96B18 629 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-206ENST00000477085 SDSLQ96GA7 329 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 SNX22Q96L94 193 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 GAFA1Q96PS6 74 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 CCL13Q99616 98 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-206ENST00000477085 FXYD6Q9H0Q3 95 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 MED28Q9H204 178 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 TMEM106BQ9NUM4 274 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 ZNF69Q9UC07 566 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 KIR2DS1A0A191URI9 304 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 TMEM30CPA0ZSE6 113 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 LYNX1G3V0Z9 82 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 K7N7A8 449 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 TNFRSF13BO14836 293 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-206ENST00000477085 FCN3O75636 299 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 LYNX1P0DP58 116 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 IRF2P14316 349 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 COL8A2P25067 703 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 KIR2DS4P43632 304 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 PAX5Q02548 391 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 DHRS2Q13268 280 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms