RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 OR51T1Q8NGJ9 327 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 OR2G2Q8NGZ5 317 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 CREB3L1Q96BA8 519 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 MNTQ99583 582 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 KRTAP17-1Q9BYP8 105 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 ABCG5Q9H222 651 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 KRT84Q9NSB2 600 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 AMMECR1Q9Y4X0 333 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-219ENST00000476625 SMAD5-AS1Q9Y6J3 95 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
HDAC6-219ENST00000476625 FUOMA2VDF0 154 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 AQP12BA6NM10 295 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 AP4M1O00189 453 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 HCKP08631 526 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 OR2T7P0C7T2 308 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 UBCP0CG48 685 aaKnown RBP9.31□□□□□ -0.92
HDAC6-219ENST00000476625 TMEM225BP0DP42 221 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 SPNP16150 400 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 PRKACBP22694 351 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 SLC6A1P30531 599 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 RAB7AP51149 207 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 KIAA0141Q14154 515 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-219ENST00000476625 KLHL22Q53GT1 634 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 UTS2BQ765I0 119 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 C5orf24Q7Z6I8 188 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 GID4Q8IVV7 300 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 AQP12AQ8IXF9 295 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 COMMD1Q8N668 190 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 OR13C3Q8NGS6 347 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 CASTOR1Q8WTX7 329 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 C4orf3Q8WVX3 66 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 EME1Q96AY2 570 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 MBOAT4Q96T53 435 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 ISYNA1Q9NPH2 558 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 OR6C3Q9NZP0 311 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 AASSQ9UDR5 926 aa9.31□□□□□ -0.92
HDAC6-219ENST00000476625 TCRBV3S1A0A5B6 114 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 G3V318 75 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 CCRL2O00421 344 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 OCM2P0CE71 109 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 OCMP0CE72 109 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-219ENST00000476625 SLC2A2P11168 524 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-219ENST00000476625 MYF6P23409 242 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 SLURP1P55000 103 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 ZNF816Q0VGE8 651 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-219ENST00000476625 FOXE3Q13461 319 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 EBI3Q14213 229 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 FAM220AQ7Z4H9 259 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 TGIF2LXQ8IUE1 241 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 OR8H3Q8N146 312 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 RNF152Q8N8N0 203 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 TMEM104Q8NE00 496 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 CNIH3Q8TBE1 160 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 CCDC107Q8WV48 283 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 DCUN1D4Q92564 292 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 SPSB1Q96BD6 273 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 KCTD7Q96MP8 289 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 S1PR3Q99500 378 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 PALMDQ9NP74 551 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 LIN7CQ9NUP9 197 aaKnown RBP9.3□□□□□ -0.92
HDAC6-219ENST00000476625 WARS2Q9UGM6 360 aaKnown RBP9.3□□□□□ -0.92
HDAC6-219ENST00000476625 WSB1Q9Y6I7 421 aa9.3□□□□□ -0.92
HDAC6-219ENST00000476625 GABRPO00591 440 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 SULT1C4O75897 302 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 CALB2P22676 271 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 CNTFRP26992 372 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 PSMB8P28062 276 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 MNAT1P51948 309 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 FLOT2Q14254 428 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 SRSF7Q16629 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC6-219ENST00000476625 IZUMO1Q8IYV9 350 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 CHST4Q8NCG5 386 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 OR51A2Q8NGJ7 313 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 C10orf35Q96D05 121 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 RITA1Q96K30 269 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 CIB1Q99828 191 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 PCDHB16Q9NRJ7 776 aa9.29□□□□□ -0.92
HDAC6-219ENST00000476625 ZMAT5Q9UDW3 170 aaKnown RBP9.29□□□□□ -0.92
HDAC6-219ENST00000476625 OR4C45A6NMZ5 311 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 C15orf65H3BRN8 121 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 I3L521 148 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 IGHG4P01861 327 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 GAPDHP04406 335 aaKnown RBP9.28□□□□□ -0.92
HDAC6-219ENST00000476625 ELANEP08246 267 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 SNRPBP14678 240 aaKnown RBP9.28□□□□□ -0.92
HDAC6-219ENST00000476625 VDAC1P21796 283 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 ATP6V1E1P36543 226 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 GP2P55259 537 aaKnown RBP9.28□□□□□ -0.92
HDAC6-219ENST00000476625 KISS1Q15726 138 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 ZNF691Q5VV52 312 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 TMEM244Q5VVB8 128 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 KDM4DQ6B0I6 523 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 FAM71E2Q8N5Q1 922 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 OR1N2Q8NGR9 330 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 OR2T10Q8NGZ9 312 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 MYOZ3Q8TDC0 251 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 HAVCR2Q8TDQ0 301 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms