RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ANXA8P13928 327 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 C21orf33P30042 268 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 HTR1FP30939 366 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 KIR3DL2P43630 455 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 CRISP1P54107 249 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 AADACL4Q5VUY2 407 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 SLC16A12Q6ZSM3 486 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 FAM71E2Q8N5Q1 922 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZNF491Q8N8L2 437 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 OPALINQ96PE5 141 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 SPACA5Q96QH8 159 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 NCOR1P1Q9H4R4 102 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 RHOFQ9HBH0 211 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 H2AFY2Q9P0M6 372 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZNF580Q9UK33 172 aa12.75□□□□□ -0.37
APOBEC3F-203ENST00000476513 A0A1W2PQL4 384 aaPredicted RBP12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 SNX3O60493 162 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 MOSP00540 346 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 UBCP0CG48 685 aaKnown RBP12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 SOX6P35712 828 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 GABPB1Q06547 395 aaPredicted RBP12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 SRSF7Q16629 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 NXNL2Q5VZ03 156 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 ADGRG5Q8IZF4 528 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 MRGPRDQ8TDS7 321 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 FGGYQ96C11 551 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 VSIG4Q9Y279 399 aa12.74□□□□□ -0.37
APOBEC3F-203ENST00000476513 H0YJX3 145 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 SSTR5P35346 364 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 MNAT1P51948 309 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZP1P60852 638 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 EFNB1P98172 346 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 PTGES3Q15185 160 aaKnown RBP12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 PAN3Q58A45 887 aaKnown RBP12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 TMEM65Q6PI78 240 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 OR10A7Q8NGE5 316 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 DLX4Q92988 240 aaPredicted RBP12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 RBMXL1Q96E39 390 aaKnown RBP12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 NEK6Q9HC98 313 aa12.73□□□□□ -0.37
APOBEC3F-203ENST00000476513 TRAV24A0A0B4J272 114 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZNF736B4DX44 427 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 SULT1C4O75897 302 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 OCM2P0CE71 109 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZNF20P17024 532 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 CD1BP29016 333 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 PPIFP30405 207 aaKnown RBP12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 F2RL1P55085 397 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 RSBN1Q5VWQ0 802 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 ARHGAP24Q8N264 748 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 TCEANCQ8N8B7 351 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 OR6Q1Q8NGQ2 317 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 PLPPR1Q8TBJ4 325 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 TMEM163Q8TC26 289 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 BARHL1Q9BZE3 327 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
APOBEC3F-203ENST00000476513 TRAV39A0A0B4J263 110 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 MAGEA13PA6NCF6 341 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 MT-ND2P03891 347 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 OR2T7P0C7T2 308 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 SLURP1P55000 103 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 ISL1P61371 349 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 ACSM6Q6P461 480 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 Q8N1Y9 231 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 CANT1Q8WVQ1 401 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 RTN4IP1Q8WWV3 396 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 ST6GALNAC6Q969X2 333 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 LRGUKQ96M69 825 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 PRRG3Q9BZD7 231 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 ZNF107Q9UII5 783 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 WSB1Q9Y6I7 421 aa12.71□□□□□ -0.37
APOBEC3F-203ENST00000476513 B2RBV5 119 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 G3V318 75 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 APOL3O95236 402 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 IGLV1-40P01703 118 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 PAX5Q02548 391 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 TMEM244Q5VVB8 128 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 GID4Q8IVV7 300 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 OR10H4Q8NGA5 316 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 OR13C9Q8NGT0 318 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 CNIH3Q8TBE1 160 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 DNAJC9Q8WXX5 260 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 ASB9Q96DX5 294 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 NR1H4Q96RI1 486 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 MBOAT4Q96T53 435 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 SPATA25Q9BR10 227 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 CHCHD6Q9BRQ6 235 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 ALX4Q9H161 411 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 OR51J1Q9H342 316 aa12.7□□□□□ -0.38
APOBEC3F-203ENST00000476513 GHITMQ9H3K2 345 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms