RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 LHFPL4Q7Z7J7 247 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CALHM1Q8IU99 346 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 VKORC1L1Q8N0U8 176 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 FGFBP3Q8TAT2 258 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 RNF133Q8WVZ7 376 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MARS2Q96GW9 593 aaKnown RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OXGR1Q96P68 337 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CDH20Q9HBT6 801 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 LPAR3Q9UBY5 353 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 DOPEY1Q5JWR5 2465 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SORL1Q92673 2214 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SETXQ7Z333 2677 aaKnown RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 IGHV3-21A0A0B4J1V1 117 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 IGKV1-9A0A0C4DH69 117 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ANKRD30BLA7E2S9 258 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 HMSDA8MTL9 139 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MBPP02686 304 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ADCYAP1P18509 176 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 APLNRP35414 380 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SULT1A1P50225 295 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CCR5P51681 352 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TCL1AP56279 114 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CCL20P78556 96 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 FLI1Q01543 452 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 RTP5Q14D33 572 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CSRP2Q16527 193 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF705AQ6ZN79 300 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TBC1D26Q86UD7 250 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 DNASE2BQ8WZ79 361 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 LHX4Q969G2 390 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SAT2Q96F10 170 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TPPP3Q9BW30 176 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 GPR61Q9BZJ8 451 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SCPEP1Q9HB40 452 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ANKUB1A6NFN9 424 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TM4SF5O14894 197 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 PPP1R2P9O14990 202 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 DHRS3O75911 302 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 WISP2O76076 250 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CER1O95813 267 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TRGC2P03986 189 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CALCRP30988 508 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 GSK3AP49840 483 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TMEM164Q5U3C3 297 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ST6GALNAC3Q8NDV1 305 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OR5D13Q8NGL4 314 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OR4A4PQ8NGN8 299 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MRGPRDQ8TDS7 321 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SLC2A8Q9NY64 477 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ANXA10Q9UJ72 324 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 WSB1Q9Y6I7 421 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 V9GYS6 101 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 F8VVB4 439 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 F8VWA3 439 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 DEGS1O15121 323 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 FGF2P09038 288 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PSG2P11465 335 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ATP6V0CP27449 155 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ACSM6Q6P461 480 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF429Q86V71 674 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CADM4Q8NFZ8 388 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 OR10J5Q8NHC4 309 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF501Q96CX3 271 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 HS3ST6Q96QI5 342 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CABLES2Q9BTV7 478 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF426Q9BUY5 554 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 SRXN1Q9BYN0 137 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 SHARPINQ9H0F6 387 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 GPR27Q9NS67 375 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 GLS2Q9UI32 602 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 TINAGQ9UJW2 476 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PLXNB3Q9ULL4 1909 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 TRBV5-7A0A0A0MS05 114 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PRR33A8MZF0 331 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CTDSPLO15194 276 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 TSPAN2O60636 221 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 WT1P19544 449 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 NTF3P20783 257 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 DVL1P1P54792 670 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CEBPEQ15744 281 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF787Q6DD87 383 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PRSS54Q6PEW0 395 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ERASQ7Z444 233 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CCDC71LQ8N9Z2 235 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 OR1F12Q8NHA8 337 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 SSMEM1Q8WWF3 244 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 OR5B12Q96R08 314 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 TP53RKQ96S44 253 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 KCNK17Q96T54 332 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 REG4Q9BYZ8 158 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 SLCO5A1Q9H2Y9 848 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 FAM206AQ9NX38 181 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PLXNA2O75051 1894 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms