RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 PAX5Q02548 391 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 DIAPH2-AS1Q14236 149 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 IL13RA2Q14627 380 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 LTC4SQ16873 150 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 ZNF691Q5VV52 312 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 ELP2Q6IA86 826 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 ACBD7Q8N6N7 88 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 PXT1Q8NFP0 134 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 CNIH3Q8TBE1 160 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 MRGPRDQ8TDS7 321 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 RNFT2Q96EX2 444 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 PELI1Q96FA3 418 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 C4orf36Q96KX1 117 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 NR1H4Q96RI1 486 aaPredicted RBP8.54□□□□□ -1.04
CDRT1-205ENST00000475944 OSBPL10Q9BXB5 764 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 GON7Q9BXV9 100 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 FAM118AQ9NWS6 357 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 OAZ3Q9UMX2 235 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 U3KQK5 164 aa8.54□□□□□ -1.04
CDRT1-205ENST00000475944 TRAV24A0A0B4J272 114 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 TMEM212A6NML5 194 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 SNTNA6NMZ2 147 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 CCRL2O00421 344 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 HSD17B6O14756 317 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 MAGEB3O15480 346 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 GAPDHP04406 335 aaKnown RBP8.53□□□□□ -1.04
CDRT1-205ENST00000475944 ZNF816Q0VGE8 651 aaPredicted RBP8.53□□□□□ -1.04
CDRT1-205ENST00000475944 EBI3Q14213 229 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 PNLIPRP3Q17RR3 467 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 CXorf66Q5JRM2 361 aaPredicted RBP8.53□□□□□ -1.04
CDRT1-205ENST00000475944 SLC25A30Q5SVS4 291 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 C9orf66Q5T8R8 295 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 RSBN1Q5VWQ0 802 aaPredicted RBP8.53□□□□□ -1.04
CDRT1-205ENST00000475944 MEDAGQ5VYS4 303 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 TGIF2LXQ8IUE1 241 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 PARP16Q8N5Y8 322 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 OR5M8Q8NGP6 311 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 OR8U1Q8NH10 309 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 RFESDQ8TAC1 157 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 CENPNQ96H22 339 aaPredicted RBP8.53□□□□□ -1.04
CDRT1-205ENST00000475944 RAX2Q96IS3 184 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 DUX3Q96PT4 197 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 GPER1Q99527 375 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 ABCG5Q9H222 651 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 LIN7CQ9NUP9 197 aaKnown RBP8.53□□□□□ -1.04
CDRT1-205ENST00000475944 DHDHQ9UQ10 334 aa8.53□□□□□ -1.04
CDRT1-205ENST00000475944 IGHV1-3A0A0C4DH29 117 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 RRP9O43818 475 aaKnown RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 MPZL2O60487 215 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 ZFPL1O95159 310 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 RPLP1P05386 114 aaKnown RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 SSTR5P35346 364 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 SNRPGP62308 76 aaKnown RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 MRPL28Q13084 256 aaKnown RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 FOXE3Q13461 319 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 GALEQ14376 348 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 KIR2DS1Q14954 304 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 RSU1Q15404 277 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 ZSCAN26Q16670 478 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 C1orf146Q5VVC0 180 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 LPCAT4Q643R3 524 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 MOB3BQ86TA1 216 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 IZUMO1Q8IYV9 350 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 OR2T10Q8NGZ9 312 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 PLPPR1Q8TBJ4 325 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 TNFAIP8L1Q8WVP5 186 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 TSEN15Q8WW01 171 aaKnown RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 EAF1Q96JC9 268 aaPredicted RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 ALG8Q9BVK2 526 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 DCLRE1BQ9H816 532 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 ORC6Q9Y5N6 252 aa8.52□□□□□ -1.05
CDRT1-205ENST00000475944 SIRT4Q9Y6E7 314 aaPredicted RBP8.52□□□□□ -1.05
CDRT1-205ENST00000475944 IGHV3-72A0A0B4J1Y9 119 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 SAC3D1A6NKF1 404 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 GABRPO00591 440 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 ELANEP08246 267 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 RAB3AP20336 220 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 GZMHP20718 246 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 IL3RAP26951 378 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 GPR12P47775 334 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 CDX1P47902 265 aaPredicted RBP8.51□□□□□ -1.05
CDRT1-205ENST00000475944 REG1BP48304 166 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 RASSF2P50749 326 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 LUMP51884 338 aaPredicted RBP8.51□□□□□ -1.05
CDRT1-205ENST00000475944 GPR50Q13585 617 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 PIGYQ3MUY2 71 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 KLHL22Q53GT1 634 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 LCNL1Q6ZST4 164 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 SATL1Q86VE3 508 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 SYS1Q8N2H4 156 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 Q8NFD4 153 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 OR5AK2Q8NH90 309 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 FAM192AQ9GZU8 254 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 EXOGQ9Y2C4 368 aaKnown RBP8.51□□□□□ -1.05
CDRT1-205ENST00000475944 LSM4Q9Y4Z0 139 aaKnown RBP8.51□□□□□ -1.05
CDRT1-205ENST00000475944 DNAH9Q9NYC9 4486 aa8.51□□□□□ -1.05
CDRT1-205ENST00000475944 A0A1W2PPE3 182 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 TMEM30CPA0ZSE6 113 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 LINC01548A6NM66 108 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms