RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 CT45A10P0DMU9 189 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 MGMTP16455 207 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 RPS4Y1P22090 263 aaKnown RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 GRPRP30550 384 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 APLNRP35414 380 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 CSNK1A1P48729 337 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 PPP1CBP62140 327 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 RPL38P63173 70 aaKnown RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 MRPS25P82663 173 aaKnown RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 PUDPQ08623 228 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 NAB1Q13506 487 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 UAP1Q16222 522 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SLC36A2Q495M3 483 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 PABPC1L2AQ5JQF8 200 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 MRPL2Q5T653 305 aaKnown RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 ZNF57Q68EA5 555 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 TMEM53Q6P2H8 277 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 TNFAIP8L2Q6P589 184 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 METAP1DQ6UB28 335 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 CCDC121Q6ZUS5 278 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SLC16A14Q7RTX9 510 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 COMTD1Q86VU5 262 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 CLECL1Q8IZS7 167 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 LRRC18Q8N456 261 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 ANKFN1Q8N957 763 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 PIFOQ8TCI5 191 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SLC7A13Q8TCU3 470 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 VN1R17PQ8TDU5 208 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 TMEM54Q969K7 222 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SLC41A3Q96GZ6 507 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SLC35G5Q96KT7 338 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 CDCA4Q9BXL8 241 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SLC38A1Q9H2H9 487 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 RMND5AQ9H871 391 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 RRAGDQ9NQL2 400 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SIRT7Q9NRC8 400 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 C1orf109Q9NX04 203 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 VNN3Q9NY84 501 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 MRPL39Q9NYK5 338 aaKnown RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 SNX24Q9Y343 169 aa3.2□□□□□ -1.9
PRKD3-208ENST00000475912 CAB39Q9Y376 341 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-208ENST00000475912 DYNC1H1Q14204 4646 aaKnown RBP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 A0A087WUJ7 227 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 A0A096LPI6 279 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 A0A1B0GVI7 797 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 LRRN3E7EW58 273 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 H3BSA7 217 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 SLC17A2O00624 439 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 LSM1O15116 133 aaKnown RBP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 EIF3HO15372 352 aaKnown RBP eCLIP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 SYNGR1O43759 233 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 FARS2O95363 451 aaKnown RBP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 SLC2A10O95528 541 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 PAHP00439 452 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 PTHP01270 115 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 IGF1P05019 195 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 IMPDH1P20839 514 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 KITLGP21583 273 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 PTBP1P26599 531 aaKnown RBP eCLIP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 BIDP55957 195 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 RPL8P62917 257 aaKnown RBP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 HOXC5Q00444 222 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 PJVKQ0ZLH3 352 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ATXN7L3Q14CW9 347 aaPredicted RBP3.19□□□□□ -1.9
PRKD3-208ENST00000475912 SYPL1Q16563 259 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ZNF181Q2M3W8 571 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ANKDD1AQ495B1 522 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 MEDAGQ5VYS4 303 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ARL9Q6T311 187 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 C10orf99Q6UWK7 81 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ZNF836Q6ZNA1 936 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ZCCHC23Q6ZST2 131 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 TMEM17Q86X19 198 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 OR5AS1Q8N127 324 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 KRTCAP2Q8N6L1 136 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 AKR7LQ8NHP1 331 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 TNFRSF14Q92956 283 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 MYDGFQ969H8 173 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ISOC1Q96CN7 298 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 TUBGCP3Q96CW5 907 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 L3HYPDHQ96EM0 354 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 SDSLQ96GA7 329 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 TEX37Q96LM6 180 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 ZNF607Q96SK3 696 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 TXN2Q99757 166 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 PAXXQ9BUH6 204 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 GPR61Q9BZJ8 451 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 EHFQ9NZC4 300 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 GLTPQ9NZD2 209 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 GSTK1Q9Y2Q3 226 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 KPTNQ9Y664 436 aa3.19□□□□□ -1.9
PRKD3-208ENST00000475912 NUP214P35658 2090 aaPredicted RBP3.18□□□□□ -1.9
PRKD3-208ENST00000475912 HSPG2P98160 4391 aa3.18□□□□□ -1.9
PRKD3-208ENST00000475912 DNAH11Q96DT5 4516 aa3.18□□□□□ -1.9
PRKD3-208ENST00000475912 TRAV36DV7A0A075B6V5 113 aa3.18□□□□□ -1.9
PRKD3-208ENST00000475912 TCRBV4S1A1TA0A5B7 111 aa3.18□□□□□ -1.9
PRKD3-208ENST00000475912 ZNF726A6NNF4 738 aa3.18□□□□□ -1.9
PRKD3-208ENST00000475912 F5H5P2 479 aa3.18□□□□□ -1.9
PRKD3-208ENST00000475912 HMGN4O00479 90 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms