RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 EMG1Q92979 244 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 NABP1Q96AH0 204 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF700Q9H0M5 742 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 TMEM265A0A087WTH1 108 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 A0A0J9YW62 118 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 LOC102725191A0A1B0GVB3 256 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 NPIPA2E9PIF3 369 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 NPIPA3F8WFD2 350 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 CYB5R3P00387 301 aaPredicted RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 ASCL1P50553 236 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 SSR4P51571 173 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 SOX8P57073 446 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 GRB2P62993 217 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 RAC1P63000 192 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 CHD3Q12873 2000 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 GPR157Q5UAW9 335 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 FAM185AQ8N0U4 392 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 AGBL5Q8NDL9 886 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 KCNG3Q8TAE7 436 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 ANGPTL4Q9BY76 406 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 SRXN1Q9BYN0 137 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 NXT1Q9UKK6 140 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 SCGNO76038 276 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 DIRAS3O95661 229 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 GUCA1AP43080 201 aaPredicted RBP11.22□□□□□ -0.61
CCNL1-216ENST00000475298 KISS1Q15726 138 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 FAM90A2PQ658T7 463 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 SSC4DQ8WTU2 575 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.22□□□□□ -0.618e-14■□□□□ 8.9
CCNL1-216ENST00000475298 GPR173Q9NS66 373 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 LRFN1Q9P244 771 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 NCKAP5O14513 1909 aa11.22□□□□□ -0.61
CCNL1-216ENST00000475298 SIAH2O43255 324 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
CCNL1-216ENST00000475298 AMY2BP19961 511 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 DSCR4P56555 118 aaPredicted RBP11.21□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF705AQ6ZN79 300 aaPredicted RBP11.21□□□□□ -0.61
CCNL1-216ENST00000475298 RPS19BP1Q86WX3 136 aaKnown RBP11.21□□□□□ -0.61
CCNL1-216ENST00000475298 TMEM123Q8N131 208 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 C17orf78Q8N4C9 275 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 OR2G3Q8NGZ4 309 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 PIGTQ969N2 578 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 ST6GALNAC5Q9BVH7 336 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 AK3Q9UIJ7 227 aa11.21□□□□□ -0.61
CCNL1-216ENST00000475298 NSG1A0A0A6YYJ2 146 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 NTN3O00634 580 aaPredicted RBP11.21□□□□□ -0.62
CCNL1-216ENST00000475298 OPN1MWP04001 364 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 CD55P08174 381 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 ATP6V0CP27449 155 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 NOVA1P51513 510 aaKnown RBP11.21□□□□□ -0.62
CCNL1-216ENST00000475298 ARFRP1Q13795 201 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 EXT1Q16394 746 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 YRDCQ86U90 279 aaKnown RBP11.21□□□□□ -0.62
CCNL1-216ENST00000475298 GJC3Q8NFK1 279 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 OR51T1Q8NGJ9 327 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 OR2Y1Q8NGV0 311 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 PARD6AQ9NPB6 346 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.62
CCNL1-216ENST00000475298 DHHO43323 396 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 IFNA21P01568 189 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 NTF4P34130 210 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 LPAL2Q16609 132 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 MRPL41Q8IXM3 137 aaKnown RBP11.2□□□□□ -0.62
CCNL1-216ENST00000475298 MAML2Q8IZL2 1156 aaPredicted RBP11.2□□□□□ -0.62
CCNL1-216ENST00000475298 C22orf15Q8WYQ4 148 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 PYGO2Q9BRQ0 406 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 ELL3Q9HB65 397 aaPredicted RBP11.2□□□□□ -0.62
CCNL1-216ENST00000475298 SH2D2AQ9NP31 389 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 PLEK2Q9NYT0 353 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 EHFQ9NZC4 300 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 PIGLQ9Y2B2 252 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 FAM221AA4D161 298 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 ITGB1BP1O14713 200 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 IGLV3-1P01715 115 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 FCGR2AP12318 317 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 TDGF1P13385 188 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 CD82P27701 267 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 OR3A2P47893 321 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 OR5I1Q13606 314 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 TAF9Q16594 264 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 OR2AE1Q8NHA4 323 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 HAS2Q92819 552 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms