RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 C17orf58Q2M2W7 97 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 ATAD3CQ5T2N8 411 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 IDNKQ5T6J7 187 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 DCAF12L2Q5VW00 463 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 OLFML2AQ68BL7 652 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 RAB12Q6IQ22 244 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 BAIAP2L2Q6UXY1 529 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 ZNF497Q6ZNH5 498 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 C6orf201Q7Z4U5 140 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 LINC00596Q86U02 117 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 OR5D13Q8NGL4 314 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 OR13A1Q8NGR1 328 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 RAB2BQ8WUD1 216 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 PTX4Q96A99 478 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 UPRTQ96BW1 309 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 ISOC1Q96CN7 298 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 AJUBAQ96IF1 538 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 ARHGAP5-AS1Q96IT6 56 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 FAAP24Q9BTP7 215 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 DCSTAMPQ9H295 470 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 C7orf69Q9H7B7 122 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 PCDHB16Q9NRJ7 776 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 ING3Q9NXR8 418 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 KIF25Q9UIL4 384 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 ELF5Q9UKW6 265 aaPredicted RBP5.72□□□□□ -1.49
LIMD1-204ENST00000474665 RAB22AQ9UL26 194 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 KCNS2Q9ULS6 477 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 PEX16Q9Y5Y5 336 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 TRRAPQ9Y4A5 3859 aa5.72□□□□□ -1.49
LIMD1-204ENST00000474665 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
LIMD1-204ENST00000474665 PLXNB1O43157 2135 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 UBE2QL1A1L167 161 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 DPPA5A6NC42 116 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 C17orf98A8MV24 154 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 RNASEK-C17orf49H0YIS7 233 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 J3QLI3 93 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 NAPSAO96009 420 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 LIPFP07098 398 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF728P0DKX0 622 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV4-38-2P0DP08 117 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 RAB6AP20340 208 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 GATA3P23771 443 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 BLVRBP30043 206 aaPredicted RBP5.71□□□□□ -1.5
LIMD1-204ENST00000474665 VEGFCP49767 419 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 EDDM3BP56851 147 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 MEF2CQ06413 473 aaPredicted RBP5.71□□□□□ -1.5
LIMD1-204ENST00000474665 KRBOX4Q5JUW0 171 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 NKAPLQ5M9Q1 402 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 SLC35E4Q6ICL7 350 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 FAM53AQ6NSI3 398 aaPredicted RBP5.71□□□□□ -1.5
LIMD1-204ENST00000474665 C1orf122Q6ZSJ8 110 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 USP43Q70EL4 1123 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 GDPD3Q7L5L3 318 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 FAM185AQ8N0U4 392 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 KIR3DL3Q8N743 410 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 MRPL30Q8TCC3 161 aaKnown RBP5.71□□□□□ -1.5
LIMD1-204ENST00000474665 DYNC2LI1Q8TCX1 351 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 CORO2AQ92828 525 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 DMRTB1Q96MA1 342 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 WDFY2Q96P53 400 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 HDHD3Q9BSH5 251 aaPredicted RBP5.71□□□□□ -1.5
LIMD1-204ENST00000474665 PECRQ9BY49 303 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 NCOR1P1Q9H4R4 102 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 LINC00574Q9H8X3 128 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 UNKLQ9H9P5 680 aaKnown RBP5.71□□□□□ -1.5
LIMD1-204ENST00000474665 ONECUT1Q9UBC0 465 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 GLS2Q9UI32 602 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 KPTNQ9Y664 436 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 AUP1Q9Y679 476 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 LINC00312Q9Y6C7 94 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 TNCP24821 2201 aa5.71□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV3OR16-10A0A075B7F0 116 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 MEIKINA0A087WXM9 373 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 CENPVL3A0A0U1RRI6 287 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1W2PQ09 198 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 hADV38S2A0JD32 116 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 NPIPB11E5RHQ5 1161 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 C15orf65H3BRN8 121 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 M0R1W7 72 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 MFNGO00587 321 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 TCF21O43680 179 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 GLAP06280 429 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 RCC1P18754 421 aaPredicted RBP5.7□□□□□ -1.5
LIMD1-204ENST00000474665 PRTN3P24158 256 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 KCNJ3P48549 501 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 SCAND1P57086 179 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 KLRD1Q13241 179 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 LDLRAD2Q5SZI1 272 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF880Q6PDB4 577 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 BTNL3Q6UXE8 466 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 VMO1Q7Z5L0 202 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 CMTM4Q8IZR5 234 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 BCL6BQ8N143 479 aaPredicted RBP5.7□□□□□ -1.5
LIMD1-204ENST00000474665 PNKDQ8N490 385 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 PIP4P2Q8N4L2 257 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 DTX3Q8N9I9 347 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 OR10R2Q8NGX6 335 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 PPP1R35Q8TAP8 253 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 UBALD1Q8TB05 177 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms