RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FBXO9Q9UK97 447 aaPredicted RBP8.31□□□□□ -1.08
USP39-214ENST00000474572 TMED3Q9Y3Q3 217 aa8.31□□□□□ -1.08
USP39-214ENST00000474572 TMEM56-RWDD3S4R434 201 aa8.31□□□□□ -1.08
USP39-214ENST00000474572 IGKV1D-13A0A0B4J2D9 117 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 CLEC18AA5D8T8 446 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 A8MXK9 166 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 F5H0A9 414 aaPredicted RBP8.3□□□□□ -1.08
USP39-214ENST00000474572 MKRN2OSH3BPM6 223 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 CDIPTO14735 213 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 TAAR5O14804 337 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 FGF16O43320 207 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 CDS2O95674 445 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 IGKV1-13P0DP09 117 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 HKR1P10072 659 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 ZNF44P15621 663 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 UCP1P25874 307 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 NUP62P37198 522 aaPredicted RBP8.3□□□□□ -1.08
USP39-214ENST00000474572 TDGF1P3P51864 188 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 SP6Q3SY56 376 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 PAN3Q58A45 887 aaKnown RBP8.3□□□□□ -1.08
USP39-214ENST00000474572 LYZL2Q7Z4W2 148 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 C5orf24Q7Z6I8 188 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 CLEC18CQ8NCF0 446 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 OR5T2Q8NGG2 359 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 OR4D5Q8NGN0 318 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 LRRC20Q8TCA0 184 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 RDH5Q92781 318 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 IL22RA2Q969J5 263 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 USB1Q9BQ65 265 aaKnown RBP8.3□□□□□ -1.08
USP39-214ENST00000474572 TOLLIPQ9H0E2 274 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 C11orf1Q9H5F2 150 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 PFDN2Q9UHV9 154 aa8.3□□□□□ -1.08
USP39-214ENST00000474572 CHD3Q12873 2000 aaKnown RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 A0A1B0GW55 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 C3orf80F5H4A9 247 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 H0Y980 276 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 I3L521 148 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 K7EPK0 472 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 HSPB6O14558 160 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 HS3ST1O14792 307 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 SH2D1BO14796 132 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 BET1O15155 118 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 PHF1O43189 567 aaPredicted RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 GAPDHP04406 335 aaKnown RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4L2P0CJ85 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4L3P0CJ86 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4L4P0CJ87 422 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4L5P0CJ88 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4L6P0CJ89 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4L7P0CJ90 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 RCC1P18754 421 aaPredicted RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 SPINK2P20155 84 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 ZP3P21754 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 CD200P41217 278 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 PAX5Q02548 391 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 FIP1L1Q6UN15 594 aaKnown RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 WDR82Q6UXN9 313 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 ZNF818PQ6ZRF7 136 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 TBC1D26Q86UD7 250 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 BAP18Q8IXM2 172 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 RPRMLQ8N4K4 120 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 FAM71E2Q8N5Q1 922 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 SLC35G3Q8N808 338 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 ZNF565Q8N9K5 539 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 RELL2Q8NC24 303 aaPredicted RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 BVESQ8NE79 360 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 ABHD14BQ96IU4 210 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 C1QTNF6Q9BXI9 259 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
USP39-214ENST00000474572 PLEKHA2Q9HB19 425 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 GSKIPQ9P0R6 139 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 DUX4Q9UBX2 424 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 TINAGQ9UJW2 476 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 OR2W1Q9Y3N9 320 aa8.29□□□□□ -1.08
USP39-214ENST00000474572 E5RGE8 158 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 SIRPB1O00241 398 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 KCNAB3O43448 404 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 TIMM8AO60220 97 aaPredicted RBP8.28□□□□□ -1.08
USP39-214ENST00000474572 NXPH2O95156 264 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 HAND1O96004 215 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 MBPP02686 304 aaPredicted RBP8.28□□□□□ -1.08
USP39-214ENST00000474572 ZNF250P15622 560 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 GCH1P30793 250 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 S100A10P60903 97 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 EIF5AP63241 154 aaKnown RBP8.28□□□□□ -1.08
USP39-214ENST00000474572 NKX6-1P78426 367 aaPredicted RBP8.28□□□□□ -1.08
USP39-214ENST00000474572 MZT1Q08AG7 82 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 GTF3C1Q12789 2109 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 SMCO1Q147U7 214 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 MSMPQ1L6U9 139 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 TMEM268Q5VZI3 342 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 SLC35E4Q6ICL7 350 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 FAM180AQ6UWF9 173 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 ACP7Q6ZNF0 438 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 SELENOHQ8IZQ5 122 aaKnown RBP8.28□□□□□ -1.08
USP39-214ENST00000474572 OR5D13Q8NGL4 314 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 OR10Z1Q8NGY1 313 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 LILRB1Q8NHL6 650 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms