RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SMCHD1A6NHR9 2005 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 C3orf80F5H4A9 247 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 CHEK1O14757 476 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 RHBDL1O75783 438 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ACSM4P0C7M7 580 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 CTLA4P16410 223 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TGIF1Q15583 401 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ALKBH6Q3KRA9 238 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM155Q4W5P6 130 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ZBTB46Q86UZ6 589 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 PDPNQ86YL7 162 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 WDR31Q8NA23 367 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SMIM4Q8WVI0 70 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 IL22RA2Q969J5 263 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 NARFLQ9H6Q4 476 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 NAA60Q9H7X0 242 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 UFC1Q9Y3C8 167 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 OR2W1Q9Y3N9 320 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TBL2Q9Y4P3 447 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 KPTNQ9Y664 436 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 U3KQ87 197 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 M0R1W7 72 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SPDEFO95238 335 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 WISP3O95389 354 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TCRBP04435 133 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 VDAC2P45880 294 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 GNG10P50151 68 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 RPL30P62888 115 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SPNS2Q8IVW8 549 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ADAD2Q8NCV1 583 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 BBS1Q8NFJ9 593 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MISP3Q96FF7 219 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 OR2D2Q9H210 308 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 BEX1Q9HBH7 125 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 CHCHD2Q9Y6H1 151 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MYO5AQ9Y4I1 1855 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF705EA8MWA4 302 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 NPIPB11E5RHQ5 1161 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 CDIPTO14735 213 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 OR7C2O60412 319 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 SEMG1P04279 462 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 IGFBP1P08833 259 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 AREGP15514 252 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 NPY1RP25929 384 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 PSG4Q00888 419 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 MESTQ5EB52 335 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 CBLN3Q6UW01 205 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 LYPD4Q6UWN0 246 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 DPPA3Q6W0C5 159 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 MAVSQ7Z434 540 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 SUMF1Q8NBK3 374 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 OR8U1Q8NH10 309 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 DDB2Q92466 427 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 RBPMSQ93062 196 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 MEGF10Q96KG7 1140 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ADGRL4Q9HBW9 690 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 SLC6A13Q9NSD5 602 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 MYEF2Q9P2K5 600 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 NKX1-2Q9UD57 310 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 MRM2Q9UI43 246 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 TGFAP01135 160 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 SBK3P0C264 359 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 H2AFB1P0C5Y9 115 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 CRYGSP22914 178 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 PSMB6P28072 239 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 RBM11P57052 281 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 PKIAP61925 76 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ASAH1Q13510 395 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 OR5I1Q13606 314 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM177Q53S58 311 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 SPANXN5Q5MJ07 72 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 FDX2Q6P4F2 183 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ETV3LQ6ZN32 361 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ACOT7LQ6ZUV0 252 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 PRSS33Q8NF86 280 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 RNF166Q96A37 237 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 YIPF6Q96EC8 236 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 IFT22Q9H7X7 185 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 TREM2Q9NZC2 230 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 LINC00312Q9Y6C7 94 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF646O15015 1829 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 C3orf85A0A1B0GTC6 90 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 NPIPB6E9PJ23 425 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 CHST1O43916 411 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ACAA2P42765 397 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 CDKN2AP42771 156 aaKnown RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 ETV1P50549 477 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 RPEL1Q2QD12 228 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 KHDC3LQ587J8 217 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 OR8G2PQ6IF36 304 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 OR2G3Q8NGZ4 309 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 KLF14Q8TD94 323 aaPredicted RBP4□□□□□ -1.77
CCNL1-215ENST00000474539 GIMAP1Q8WWP7 306 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 C7orf69Q9H7B7 122 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 MANBALQ9NQG1 85 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ANXA10Q9UJ72 324 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 ZMIZ1Q9ULJ6 1067 aa4□□□□□ -1.77
CCNL1-215ENST00000474539 DSPPQ9NZW4 1301 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms