RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SPATA33Q96N06 139 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 P2RX4Q99571 388 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 RNF126Q9BV68 326 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 NUDT9Q9BW91 350 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 RERGLQ9H628 205 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 HINT3Q9NQE9 182 aaKnown RBP6.29□□□□□ -1.4
GPNMB-209ENST00000474157 FAM206AQ9NX38 181 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 FBXL17Q9UF56 701 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 IL36AQ9UHA7 158 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 SLC7A7Q9UM01 511 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 PSG8Q9UQ74 426 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 UFC1Q9Y3C8 167 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 CSAG2Q9Y5P2 127 aa6.29□□□□□ -1.4
GPNMB-209ENST00000474157 FNDC1Q4ZHG4 1894 aaPredicted RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SMIM30A4D0T7 59 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SERINC4A6NH21 518 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 K7ESM1 405 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 NPIPB7O75200 414 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 HYPMO75409 117 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 IFNW1P05000 195 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 PFN1P07737 140 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ARSAP15289 507 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ST6GAL1P15907 406 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ELAVL4P26378 380 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 PYCR1P32322 319 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 BSGP35613 385 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 GDF5P43026 501 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SOX2P48431 317 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 TCTAP57738 103 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 RPS14P62263 151 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ZNF92Q03936 586 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 FOXF1Q12946 379 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 OR7A5Q15622 319 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ADIRFQ15847 76 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ANKRD55Q3KP44 614 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SLC25A52Q3SY17 297 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SPANXN4Q5MJ08 99 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ENTPD8Q5MY95 495 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 NCBP2-AS2Q69YL0 99 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 KCNIP4Q6PIL6 250 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 PAQR6Q6TCH4 344 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 UNQ5815/PRO19632Q6UWF5 114 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 FOXI2Q6ZQN5 318 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 MOB1BQ7L9L4 216 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 PRSS45Q7RTY3 260 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 NR2C2APQ86WQ0 139 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 UEVLDQ8IX04 471 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ZNF615Q8N8J6 731 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ST6GALNAC3Q8NDV1 305 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 OR4C16Q8NGL9 310 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 OR1B1Q8NGR6 318 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 GPR150Q8NGU9 434 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 FAM46BQ96A09 425 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ESAMQ96AP7 390 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SDSLQ96GA7 329 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SCGB3A2Q96PL1 93 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 C16orf70Q9BSU1 422 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ABHD14AQ9BUJ0 271 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 SNRNP25Q9BV90 132 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 QTRT1Q9BXR0 403 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 TMEM126AQ9H061 195 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 MAGEH1Q9H213 219 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 TVP23BQ9NYZ1 205 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 KCNIP1Q9NZI2 227 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 KLK11Q9UBX7 282 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 PCTPQ9UKL6 214 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 HSF4Q9ULV5 492 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 MRPS33Q9Y291 106 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 RNF115Q9Y4L5 304 aa6.28□□□□□ -1.4
GPNMB-209ENST00000474157 PDCD11Q14690 1871 aaKnown RBP6.28□□□□□ -1.4
GPNMB-209ENST00000474157 ZZEF1O43149 2961 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 CEP295Q9C0D2 2601 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 A0A1W2PS29 197 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 OR51F1A6NGY5 319 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 H0Y980 276 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 KIR2DS3K7RE56 304 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 M0R1X1 148 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 FOXH1O75593 365 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 KLF8O95600 359 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-209ENST00000474157 TBX6O95947 436 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-209ENST00000474157 NRASP01111 189 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 IFNA1P01562 189 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 HLA-HP01893 362 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 ELANEP08246 267 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 AREGP15514 252 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 ACRV1P26436 265 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 HTR6P50406 440 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 ARG2P78540 354 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 HIST1H1AQ02539 215 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-209ENST00000474157 ZFP36L1Q07352 338 aaKnown RBP6.27□□□□□ -1.41
GPNMB-209ENST00000474157 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 GNMTQ14749 295 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 KIR2DS3Q14952 304 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 LPAL2Q16609 132 aa6.27□□□□□ -1.41
GPNMB-209ENST00000474157 DUSP5Q16690 384 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms