RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 NFYBP25208 207 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 HABP2Q14520 560 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-203ENST00000474056 INSL4Q14641 139 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 RNLSQ5VYX0 342 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 GLIPR1L1Q6UWM5 242 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 MRGPRDQ8TDS7 321 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 OR5M11Q96RB7 305 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 IFT22Q9H7X7 185 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 DPM3Q9P2X0 92 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 PITPNC1Q9UKF7 332 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 MRPS28Q9Y2Q9 187 aaKnown RBP14.42□□□□□ -0.1
UPF3A-203ENST00000474056 M0QZ24 198 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 IL1AP01583 271 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 MPV17LQ2QL34 196 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 HIST2H2BDQ6DRA6 164 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 AWAT2Q6E213 333 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 LINC00596Q86U02 117 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 LYPD6Q86Y78 171 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 KLHDC1Q8N7A1 406 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 ZNF565Q8N9K5 539 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 IDI2-AS1Q9NZ38 188 aa14.41□□□□□ -0.1
UPF3A-203ENST00000474056 LSM2Q9Y333 95 aaKnown RBP14.41□□□□□ -0.1
UPF3A-203ENST00000474056 FAM90A22PA8MWA6 464 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 GTF2F2P13984 249 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 SSTR5P35346 364 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 SLC35A2P78381 396 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 RBM39Q14498 530 aaKnown RBP14.4□□□□□ -0.1
UPF3A-203ENST00000474056 LTC4SQ16873 150 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 FBLN7Q53RD9 439 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 ATAD3CQ5T2N8 411 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 RFESDQ8TAC1 157 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 LEAP2Q969E1 77 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 MYDGFQ969H8 173 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 PCDHB16Q9NRJ7 776 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 SCN3BQ9NY72 215 aa14.4□□□□□ -0.1
UPF3A-203ENST00000474056 LEUTXA8MZ59 168 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 NPIPB11E5RHQ5 1161 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 BUB1B-PAK6H3BSN5 160 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 TOR1AO14656 332 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 TSPAN15O95858 294 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 IGHV3-7P01780 117 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 MYF6P23409 242 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 CD24P25063 80 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 MAPK3P27361 379 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-203ENST00000474056 PRRX1P54821 245 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 GP2P55259 537 aaKnown RBP14.39□□□□□ -0.11
UPF3A-203ENST00000474056 GPR176Q14439 515 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 IRF3Q14653 427 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 HERPUD1Q15011 391 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 TPTE2P1Q5T6R2 138 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 FAM27D1Q5T7N8 215 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 Q8N2B8 174 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 OR9G1Q8NH87 305 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 ANKRD60Q9BZ19 345 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 MMP28Q9H239 520 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 LINC00574Q9H8X3 128 aa14.39□□□□□ -0.11
UPF3A-203ENST00000474056 VWFP04275 2813 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 LY6LH3BQJ8 138 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 VSIG10L2P0DP72 767 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 BLCAPP62952 87 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 SPHARQ15513 63 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 MED22Q15528 200 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 ACSM3Q53FZ2 586 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 C11orf88Q6PI97 169 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 UNQ9370/PRO34162Q6UXP9 181 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 Q6ZS46 218 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 Q6ZTK2 550 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 CDH26Q8IXH8 852 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 NKAIN3Q8N8D7 197 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 C11orf44Q8N8P7 122 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 NEK7Q8TDX7 302 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 THRSPQ92748 146 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 TMED9Q9BVK6 235 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 MMP27Q9H306 513 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 BANF2Q9H503 90 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 SERTAD4Q9NUC0 356 aa14.38□□□□□ -0.11
UPF3A-203ENST00000474056 TMEM30CPA0ZSE6 113 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 H0YHG0 523 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 J3QR06 171 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 CEACAM3P40198 252 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 GNG10P50151 68 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 MS4A15Q8N5U1 240 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 TMEM104Q8NE00 496 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 CCDC107Q8WV48 283 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 CREB3L1Q96BA8 519 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 CYYR1Q96J86 154 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 PRSS22Q9GZN4 317 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 RCC2Q9P258 522 aaKnown RBP14.37□□□□□ -0.11
UPF3A-203ENST00000474056 PSG11Q9UQ72 335 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 TPRKBQ9Y3C4 175 aa14.37□□□□□ -0.11
UPF3A-203ENST00000474056 C15orf65H3BRN8 121 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 CRTAPO75718 401 aaPredicted RBP14.36□□□□□ -0.11
UPF3A-203ENST00000474056 MGMTP16455 207 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 BRS3P32247 399 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 VHLP40337 213 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 TMEM95Q3KNT9 176 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 ZNF497Q6ZNH5 498 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 DTX3Q8N9I9 347 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 OR10A7Q8NGE5 316 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms