RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SPSB4Q96A44 273 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ANAPC16Q96DE5 110 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 FBXO17Q96EF6 278 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 BSCL2Q96G97 398 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 SGCZQ96LD1 299 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 CALHM2Q9HA72 323 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 CHCHD2Q9Y6H1 151 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 LOC102723996A0A087X1L8 192 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 CD300LBA8K4G0 201 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TRAPPC2LH3BP13 241 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TUSC2O75896 110 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 DKK1O94907 266 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 METTL15P1P0C7V9 234 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 COX5BP10606 129 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 CCKARP32238 428 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 ZNF92Q03936 586 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 RNPS1Q15287 305 aaKnown RBP5.28□□□□□ -1.56
HERC4-209ENST00000473533 SNAI3Q3KNW1 292 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TSPO2Q5TGU0 170 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TMEM183AQ8IXX5 376 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 PIGCQ92535 297 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 OR6C1Q96RD1 312 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TPSD1Q9BZJ3 242 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 SMOC1Q9H4F8 434 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 MANBALQ9NQG1 85 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 SLC7A10Q9NS82 523 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 LIN7CQ9NUP9 197 aaKnown RBP5.28□□□□□ -1.56
HERC4-209ENST00000473533 ATP23Q9Y6H3 246 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 PHF3Q92576 2039 aaKnown RBP5.28□□□□□ -1.56
HERC4-209ENST00000473533 SEC16AO15027 2179 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 FRYLO94915 3013 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 A0A1B0GV50 99 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 ZNF814B7Z6K7 855 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TMEM250H0YL14 139 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 H0YL77 283 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 MKRN2OSH3BPM6 223 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 RAMP1O60894 148 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 KLK3P07288 261 aaPredicted RBP5.28□□□□□ -1.56
HERC4-209ENST00000473533 SRFP11831 508 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 OMGP23515 440 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 DDTP30046 118 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 SRD5A2P31213 254 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TGIF1Q15583 401 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 PIGYQ3MUY2 71 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 TMEM41BQ5BJD5 291 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 KCNIP4Q6PIL6 250 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 CLEC9AQ6UXN8 241 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 RPS19BP1Q86WX3 136 aaKnown RBP5.28□□□□□ -1.56
HERC4-209ENST00000473533 ZNF611Q8N823 705 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 SMRP1Q8NCR6 262 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 RLN3Q8WXF3 142 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 NAT6Q93015 286 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
HERC4-209ENST00000473533 SSX3Q99909 188 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 GNG13Q9P2W3 67 aa5.28□□□□□ -1.56
HERC4-209ENST00000473533 ZNF727A8MUV8 499 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 PPP5D1E7EU14 171 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 PROB1E7EW31 1015 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 CHST1O43916 411 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 HLA-HP01893 362 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 DBHP09172 617 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 F2RP25116 425 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 PSMB3P49720 205 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 FAM3BP58499 235 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 CFHR1Q03591 330 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 RSPO1Q2MKA7 263 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 NCR3LG1Q68D85 454 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SP5Q6BEB4 398 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 Q6ZS52 159 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 THNSL2Q86YJ6 484 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 LILRB2Q8N423 598 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 OR11L1Q8NGX0 322 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 ZNF385AQ96PM9 386 aaKnown RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 SPSB2Q99619 263 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 FOXB1Q99853 325 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 OR2H1Q9GZK4 316 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 MAGT1Q9H0U3 335 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 DUSP15Q9H1R2 295 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 LIME1Q9H400 295 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 P4HTMQ9NXG6 502 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 LHX6Q9UPM6 363 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 E9PLN8 166 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 NAPSAO96009 420 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 TRGC2P03986 189 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 OPN1LWP04000 364 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 TRGC1P0CF51 173 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 ZNF32P17041 273 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 GPX4P36969 197 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 TAS2R60P59551 318 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 RPS18P62269 152 aaKnown RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 IL11RAQ14626 422 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 MSMO1Q15800 293 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SSX2Q16385 188 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 TMEM241Q24JQ0 296 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 ZNF774Q6NX45 483 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 CYP2G1PQ6ZSU1 146 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 ZDHHC23Q8IYP9 409 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 GAPTQ8N292 157 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SUMF1Q8NBK3 374 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms