RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CCRL2O00421 344 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 ZNF780AO75290 641 aaPredicted RBP10.73□□□□□ -0.69
CHD3-209ENST00000473376 MPIG6BO95866 241 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 CD2P06729 351 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 NFYBP25208 207 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 MYCNOSP40205 109 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 THBS3P49746 956 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 RPL23AP62750 156 aaKnown RBP10.73□□□□□ -0.69
CHD3-209ENST00000473376 SLC35B1P78383 322 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 ZNF816Q0VGE8 651 aaPredicted RBP10.73□□□□□ -0.69
CHD3-209ENST00000473376 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 LHFPL3Q86UP9 236 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 LINC00311Q8N616 119 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
CHD3-209ENST00000473376 KIF25Q9UIL4 384 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 ORC5O43913 435 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 GAPDHP04406 335 aaKnown RBP10.72□□□□□ -0.69
CHD3-209ENST00000473376 SNRNP70P08621 437 aaKnown RBP10.72□□□□□ -0.69
CHD3-209ENST00000473376 GLP1RP43220 463 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 RBM39Q14498 530 aaKnown RBP10.72□□□□□ -0.69
CHD3-209ENST00000473376 RSU1Q15404 277 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 MPV17LQ2QL34 196 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 LPCAT4Q643R3 524 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 RPL22L1Q6P5R6 122 aaKnown RBP10.72□□□□□ -0.69
CHD3-209ENST00000473376 RNF144BQ7Z419 303 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 TGIF2LXQ8IUE1 241 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 FOXRED2Q8IWF2 684 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 MRPL41Q8IXM3 137 aaKnown RBP10.72□□□□□ -0.69
CHD3-209ENST00000473376 OR8H1Q8NGG4 311 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 OR13A1Q8NGR1 328 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 GPR148Q8TDV2 347 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 C9orf16Q9BUW7 83 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 ISG20L2Q9H9L3 353 aaKnown RBP10.72□□□□□ -0.69
CHD3-209ENST00000473376 RAB9BQ9NP90 201 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 TMEM138Q9NPI0 162 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 ZNF580Q9UK33 172 aa10.72□□□□□ -0.69
CHD3-209ENST00000473376 FAM172BPA6NC97 362 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 H3BNX3 289 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 GABRPO00591 440 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 TMEM11P17152 192 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 KIAA2026Q5HYC2 2103 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 STEAP3Q658P3 488 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 OR2W3Q7Z3T1 314 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 IZUMO1Q8IYV9 350 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 CBR4Q8N4T8 237 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 DRAM1Q8N682 238 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 OR10X1Q8NGY0 326 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 OR56B4Q8NH76 319 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 DNAH3Q8TD57 4116 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 TNFAIP8L1Q8WVP5 186 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 TSEN15Q8WW01 171 aaKnown RBP10.71□□□□□ -0.69
CHD3-209ENST00000473376 PYDC1Q8WXC3 89 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 MRPS24Q96EL2 167 aaKnown RBP10.71□□□□□ -0.69
CHD3-209ENST00000473376 GPER1Q99527 375 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 P2RX4Q99571 388 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 B9D2Q9BPU9 175 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 PDCD1LG2Q9BQ51 273 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 CHCHD6Q9BRQ6 235 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 DPCDQ9BVM2 203 aaPredicted RBP10.71□□□□□ -0.69
CHD3-209ENST00000473376 SPACA1Q9HBV2 294 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHD3-209ENST00000473376 LIN7CQ9NUP9 197 aaKnown RBP10.71□□□□□ -0.69
CHD3-209ENST00000473376 FAM118AQ9NWS6 357 aa10.71□□□□□ -0.69
CHD3-209ENST00000473376 IRGMA1A4Y4 181 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 SERPINE3A8MV23 424 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 H0YHG0 523 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 AP4M1O00189 453 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 TXNL1O43396 289 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 RAMP3O60896 148 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 GPX5O75715 221 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 DCKP27707 260 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 CD1BP29016 333 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 KRTAP10-11P60412 298 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 GPR176Q14439 515 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 TEX38Q6PEX7 206 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 UNQ9370/PRO34162Q6UXP9 181 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 ETV3LQ6ZN32 361 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 SLC35E3Q7Z769 313 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 Q8N6K4 173 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 RDH12Q96NR8 316 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 METTL9Q9H1A3 318 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 ABCG5Q9H222 651 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 FGF20Q9NP95 211 aaPredicted RBP10.7□□□□□ -0.7
CHD3-209ENST00000473376 ST3GAL6Q9Y274 331 aa10.7□□□□□ -0.7
CHD3-209ENST00000473376 LOC100130705A0A1B0GUX0 176 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 TMEM30CPA0ZSE6 113 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 E9PI62 339 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 HSD17B6O14756 317 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 CSTBP04080 98 aaKnown RBP10.69□□□□□ -0.7
CHD3-209ENST00000473376 LIMS3P0CW19 117 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 LIMS4P0CW20 117 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 IL3RAP26951 378 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 ZNF137PP52743 207 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 RBM11P57052 281 aaKnown RBP10.69□□□□□ -0.7
CHD3-209ENST00000473376 HES1Q14469 280 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 ZIK1Q3SY52 487 aaPredicted RBP10.69□□□□□ -0.7
CHD3-209ENST00000473376 KHDC1LQ5JSQ8 128 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 C9orf152Q5JTZ5 239 aa10.69□□□□□ -0.7
CHD3-209ENST00000473376 UTF1Q5T230 341 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms