RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 RUNX1Q01196 453 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 EDDM3AQ14507 147 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 RNPS1Q15287 305 aaKnown RBP7.94□□□□□ -1.14
COL6A3-210ENST00000473258 FNDC7Q5VTL7 733 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 RASL11AQ6T310 242 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 SLC36A1Q7Z2H8 476 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 OSR2Q8N2R0 312 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 EPHX3Q9H6B9 360 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 BLACEA4D250 179 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 HLA-DQB1P01920 261 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 CD300EQ496F6 205 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-210ENST00000473258 TMEM25Q86YD3 366 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 ZNF296Q8WUU4 475 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-210ENST00000473258 SDHCQ99643 169 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-210ENST00000473258 MS4A8Q9BY19 250 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 SLCO1C1Q9NYB5 712 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 ANXA10Q9UJ72 324 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 ADAMTSL5Q6ZMM2 481 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 WFDC8Q8IUA0 241 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 OR1L1Q8NH94 360 aa7.94□□□□□ -1.14
COL6A3-210ENST00000473258 RNASE1P07998 156 aaKnown RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CKS2P33552 79 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 FUT6P51993 359 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 IRF3Q14653 427 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 GCSAMLQ5JQS6 135 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 C15orf39Q6ZRI6 1047 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 OLIG3Q7RTU3 272 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 ARIH2OSQ8N7S6 290 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 IGSF21Q96ID5 467 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 WDR83Q9BRX9 315 aaKnown RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 PBOV1Q9GZY1 135 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 ODAMA1E959 279 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CD5LO43866 347 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CA6P23280 308 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 FCGR2BP31994 310 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 RPS27P42677 84 aaKnown RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CLDN17P56750 224 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 H2BFSP57053 126 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 PRDX4Q13162 271 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 MORN3Q6PF18 240 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 C17orf47Q8NEP4 570 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CYB5D2Q8WUJ1 264 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 APOBEC3DQ96AK3 386 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 HCRTO43612 131 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 IFITM1P13164 125 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 GFI1BQ5VTD9 330 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 TXNDC8Q6A555 127 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 OR2V1Q8NHB1 315 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 TMED7-TICAM2A0A0A6YYA0 188 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 GAGE12HA6NDE8 117 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 CLDN2P57739 230 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 HSF5Q4G112 596 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 GALMQ96C23 342 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 GNRHR2Q96P88 292 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 ZNF385AQ96PM9 386 aaKnown RBP7.93□□□□□ -1.14
COL6A3-210ENST00000473258 GP6Q9HCN6 339 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 SELENOKQ9Y6D0 94 aa7.93□□□□□ -1.14
COL6A3-210ENST00000473258 P04436 131 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 TMEM155Q4W5P6 130 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 ADAD2Q8NCV1 583 aaKnown RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 HMGN4O00479 90 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 SH2D1BO14796 132 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 FAM219AQ8IW50 185 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 OR1K1Q8NGR3 316 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 HSD17B10Q99714 261 aaKnown RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 NAA38Q9BRA0 125 aaKnown RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 ALG1L2C9J202 215 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 HOXA3O43365 443 aaPredicted RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 FAM182BQ5T319 152 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 MRGPREQ86SM8 312 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 TM4SF18Q96CE8 201 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 DEFB118Q96PH6 123 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 BCL2L10Q9HD36 194 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 MBNL3Q9NUK0 354 aaKnown RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 POLDIP2Q9Y2S7 368 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 SETD1AO15047 1707 aaKnown RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 A0A1W2PQM1 296 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 LINC01553A4QN01 128 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 PLPP3O14495 311 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 PNLIPP16233 465 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 KIR3DL2P43630 455 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 P2RY6Q15077 328 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 MPV17L2Q567V2 206 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 CYP2G1PQ6ZSU1 146 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 LYZL2Q7Z4W2 148 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 SLC16A11Q8NCK7 471 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 OR4A5Q8NH83 315 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 NT5CQ8TCD5 201 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 FLYWCH2Q96CP2 140 aaKnown RBP7.92□□□□□ -1.14
COL6A3-210ENST00000473258 GNB4Q9HAV0 340 aa7.92□□□□□ -1.14
COL6A3-210ENST00000473258 TRAV2A0A0B4J234 112 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms