RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, human

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIK3-208	ENST00000472648	FBXL17	Q9UF56	701 aa		4.41	□□□□□ -1.7
SIK3-208	ENST00000472648	SRRM2	Q9UQ35	2752 aa	Known RBP	4.41	□□□□□ -1.7
SIK3-208	ENST00000472648	LRP1B	Q9NZR2	4599 aa		4.4	□□□□□ -1.7
SIK3-208	ENST00000472648	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	FAM90A10P	A6NDY2	464 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	SAC3D1	A6NKF1	404 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF729	A6NN14	1252 aa	Predicted RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648		M0R2N4	97 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	SPRY2	O43597	315 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	IGHV3-7	P01780	117 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	SEMG1	P04279	462 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	GAPDH	P04406	335 aa	Known RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	INAFM2	P0DMQ5	153 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ANXA8	P13928	327 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	MPZ	P25189	248 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	MAGEA2	P43356	314 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	OMP	P47874	163 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	OR3A1	P47881	315 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	REG1B	P48304	166 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ERVK11-1	P61568	191 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	PPP1R8	Q12972	351 aa	Known RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	IL24	Q13007	206 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	APOF	Q13790	326 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	RCN1	Q15293	331 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ECSCR	Q19T08	205 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	TEX30	Q5JUR7	227 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	SLC35F1	Q5T1Q4	408 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	UTF1	Q5T230	341 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	RPL13AP3	Q6NVV1	102 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	AMIGO2	Q86SJ2	522 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ENTHD1	Q8IYW4	607 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF645	Q8N7E2	425 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	OR2K2	Q8NGT1	345 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	OR6K6	Q8NGW6	343 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	TEX47	Q8TBZ9	253 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	CASTOR1	Q8WTX7	329 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	RNF133	Q8WVZ7	376 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	CORO2A	Q92828	525 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	EMG1	Q92979	244 aa	Known RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	LEAP2	Q969E1	77 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	OTULIN	Q96BN8	352 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	CENPN	Q96H22	339 aa	Predicted RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	KIRREL1	Q96J84	757 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	CEP19	Q96LK0	163 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	MNT	Q99583	582 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	C9orf16	Q9BUW7	83 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ABHD6	Q9BV23	337 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	PKIB	Q9C010	78 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	MFF	Q9GZY8	342 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	VCX3B	Q9H321	246 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	OR52D1	Q9H346	318 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ZCCHC4	Q9H5U6	513 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	RANGRF	Q9HD47	186 aa	Predicted RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	PLSCR3	Q9NRY6	295 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	GPR173	Q9NS66	373 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	SLC23A1	Q9UHI7	598 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ENOPH1	Q9UHY7	261 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	FOXA2	Q9Y261	457 aa	Predicted RBP	4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	ERGIC3	Q9Y282	383 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	TP53TG1	Q9Y2A0	90 aa		4.4	□□□□□ -1.71
SIK3-208	ENST00000472648	MYCBP2	O75592	4640 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	PQLC2L	A1A4F0	135 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ODAM	A1E959	279 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	MSGN1	A6NI15	193 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	IGLL5	B9A064	214 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648		F8VVB4	439 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648		F8VWA3	439 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	IDH3B	O43837	385 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	INMT	O95050	263 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	GAST	P01350	101 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	IFNG	P01579	166 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ATP6V1B1	P15313	513 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	OPRL1	P41146	370 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	F2RL1	P55085	397 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	SNU13	P55769	128 aa	Known RBP	4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	SYNJ2BP	P57105	145 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	TPPP2	P59282	170 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	PSMA6	P60900	246 aa	Known RBP	4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF91	Q05481	1191 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	AES	Q08117	197 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	TSPAN31	Q12999	210 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	GUCA2B	Q16661	112 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	LTC4S	Q16873	150 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	DEFB135	Q30KP9	77 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	SOHLH1	Q5JUK2	328 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	PYHIN1	Q6K0P9	492 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	KRT74	Q7RTS7	529 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ANGPTL5	Q86XS5	388 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	PQLC1	Q8N2U9	271 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	YIPF7	Q8N8F6	280 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF511	Q8NB15	262 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF555	Q8NEP9	628 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	OR9Q2	Q8NGE9	314 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	OR6N2	Q8NGY6	317 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNRF4	Q8WWF5	429 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	DNAJC9	Q8WXX5	260 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	SLAMF9	Q96A28	289 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	NRBF2	Q96F24	287 aa		4.39	□□□□□ -1.71
SIK3-208	ENST00000472648	DHRS1	Q96LJ7	313 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms