RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 G3V4G9 280 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 H3BUI4 141 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 J3QR06 171 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 XPNPEP2O43895 674 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 PEX14O75381 377 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 IGHV3-7P01780 117 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 CSTBP04080 98 aaKnown RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 GNAO1P09471 354 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 FSTP19883 344 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 SERPINA2P20848 420 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 C21orf33P30042 268 aaPredicted RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 SSTR5P35346 364 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 KCNJ3P48549 501 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 MED21Q13503 144 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 RIPK1Q13546 671 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 Q499Y3 187 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 YIF1BQ5BJH7 314 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 LAIR2Q6ISS4 152 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 NDUFA11Q86Y39 141 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 C8orf59Q8N0T1 100 aaPredicted RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 RFESDQ8TAC1 157 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 TOMM40LQ969M1 308 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 CREB3L1Q96BA8 519 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 AKR1E2Q96JD6 320 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 OR14A2Q96R54 314 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 ZNF184Q99676 751 aaPredicted RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 SLC25A33Q9BSK2 321 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 DPCDQ9BVM2 203 aaPredicted RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 METTL9Q9H1A3 318 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 MMP28Q9H239 520 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 IFT22Q9H7X7 185 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 LINC00574Q9H8X3 128 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 IDI2-AS1Q9NZ38 188 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.21□□□□□ -1.26
USF1-204ENST00000472217 PSG11Q9UQ72 335 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 HSPE1-MOB4S4R3N1 261 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 WNK1Q9H4A3 2382 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 TRBV5-7A0A0A0MS05 114 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 PNMA8CA0A1B0GUJ8 204 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 A0A1W2PP11 408 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 EFCAB10A6NFE3 127 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 GEMIN2O14893 280 aaKnown RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 CASQ2O14958 399 aaPredicted RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 GPX5O75715 221 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 OR7C1O76099 320 aaPredicted RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 OR2F2O95006 317 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 AMY1AP04745 511 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 AMY2AP04746 511 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 LPLP06858 475 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 CAPGP40121 348 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 MNDAP41218 407 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 GNG10P50151 68 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 TAS2R43P59537 309 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 DOC2BQ14184 412 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 LTC4SQ16873 150 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 BEAN1Q3B7T3 259 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 SLC22A6Q4U2R8 563 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 ABCA11PQ4W5N1 156 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 OGFRL1Q5TC84 451 aaPredicted RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 SAMD5Q5TGI4 173 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 CCDC144NLQ6NUI1 221 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 AHSA2Q719I0 299 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 CAPSLQ8WWF8 208 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 RPEQ96AT9 228 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 KCTD12Q96CX2 325 aaKnown RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 RBM14Q96PK6 669 aaKnown RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 S100A13Q99584 98 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 PLCXD1Q9NUJ7 323 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 PAK1IP1Q9NWT1 392 aaPredicted RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 CNOT2Q9NZN8 540 aaKnown RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 CKLFQ9UBR5 152 aa7.2□□□□□ -1.26
USF1-204ENST00000472217 AMMECR1Q9Y4X0 333 aaPredicted RBP7.2□□□□□ -1.26
USF1-204ENST00000472217 NOTCH1P46531 2555 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 A0A1W2PPE3 182 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 A0A1W2PPI3 338 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 A0A1W2PPK0 400 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 TMEM30CPA0ZSE6 113 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
USF1-204ENST00000472217 C15orf65H3BRN8 121 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 ZNF780AO75290 641 aaPredicted RBP7.19□□□□□ -1.26
USF1-204ENST00000472217 SNRNP70P08621 437 aaKnown RBP7.19□□□□□ -1.26
USF1-204ENST00000472217 GTF2F2P13984 249 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 CELP19835 753 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 WNT4P56705 351 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 CD83Q01151 205 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 EMX1Q04741 257 aaPredicted RBP7.19□□□□□ -1.26
USF1-204ENST00000472217 MADCAM1Q13477 382 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 DIAPH2-AS1Q14236 149 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 MPV17LQ2QL34 196 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 ATAD3CQ5T2N8 411 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 LINC00596Q86U02 117 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 STX19Q8N4C7 294 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 JAGN1Q8N5M9 183 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 BPIFB6Q8NFQ5 453 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 OR5AU1Q8NGC0 362 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 OR10A7Q8NGE5 316 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 OR56B4Q8NH76 319 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 NEK7Q8TDX7 302 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 FBLIM1Q8WUP2 373 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms