RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 A0A1W2PPE3 182 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 ZNF670-ZNF695F2Z2N8 137 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 DEGS1O15121 323 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 MOSP00540 346 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 PRKACBP22694 351 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 CD1BP29016 333 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 HTR1FP30939 366 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 KIR3DL2P43630 455 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 MTNR1BP49286 362 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 SLURP1P55000 103 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 SGPP2Q8IWX5 399 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 TMEM104Q8NE00 496 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 RFESDQ8TAC1 157 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 RHOFQ9HBH0 211 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 SLC25A19Q9HC21 320 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 TVP23BQ9NYZ1 205 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 KIF25Q9UIL4 384 aa14.67□□□□□ -0.06
SORT1-203ENST00000471996 SNX3O60493 162 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 IGLV1-40P01703 118 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 OR8U9P0C7N5 309 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 ATF1P18846 271 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 HAGHQ16775 308 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 YIPF7Q8N8F6 280 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 OR10A7Q8NGE5 316 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 ARPC1AQ92747 370 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 RFT1Q96AA3 541 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 ADGRL4Q9HBW9 690 aa14.66□□□□□ -0.06
SORT1-203ENST00000471996 LINC01619G3V211 115 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 RAB9AP51151 201 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 F2RL1P55085 397 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 CDK5R1Q15078 307 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 FAM98BQ52LJ0 330 aaKnown RBP14.65□□□□□ -0.06
SORT1-203ENST00000471996 TMEM179BQ7Z7N9 219 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 EME1Q96AY2 570 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 ADAT3Q96EY9 351 aaPredicted RBP14.65□□□□□ -0.06
SORT1-203ENST00000471996 ALX4Q9H161 411 aaPredicted RBP14.65□□□□□ -0.06
SORT1-203ENST00000471996 ZNF556Q9HAH1 456 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 CLN6Q9NWW5 311 aa14.65□□□□□ -0.06
SORT1-203ENST00000471996 ZNF107Q9UII5 783 aaPredicted RBP14.65□□□□□ -0.06
SORT1-203ENST00000471996 ZNF736B4DX44 427 aaPredicted RBP14.64□□□□□ -0.07
SORT1-203ENST00000471996 G3V318 75 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 HSPB6O14558 160 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 HSPA12AO43301 675 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 KRT8P05787 483 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 UTS2BQ765I0 119 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 MRGPRDQ8TDS7 321 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 SPSB1Q96BD6 273 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 OPALINQ96PE5 141 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 OR4C12Q96R67 309 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 BARHL1Q9BZE3 327 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 WSB1Q9Y6I7 421 aa14.64□□□□□ -0.07
SORT1-203ENST00000471996 LOC107986453A0A1B0GWG9 222 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 FAM90A10PA6NDY2 464 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 SSTR5P35346 364 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 GALEQ14376 348 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 SSX6Q7RTT6 188 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 DEFB107AQ8IZN7 70 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 LINC00311Q8N616 119 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 OR5D18Q8NGL1 313 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 RTN4IP1Q8WWV3 396 aaPredicted RBP14.63□□□□□ -0.07
SORT1-203ENST00000471996 TPSG1Q9NRR2 321 aa14.63□□□□□ -0.07
SORT1-203ENST00000471996 H0YJX3 145 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 PRKYO43930 277 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 CST1P01037 141 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 PITPNAQ00169 270 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 PAN3Q58A45 887 aaKnown RBP14.62□□□□□ -0.07
SORT1-203ENST00000471996 BCDIN3DQ7Z5W3 292 aaKnown RBP14.62□□□□□ -0.07
SORT1-203ENST00000471996 SAXO1Q8IYX7 474 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 RDH10Q8IZV5 341 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 PRSS35Q8N3Z0 413 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 TOLLIPQ9H0E2 274 aa14.62□□□□□ -0.07
SORT1-203ENST00000471996 TRAV24A0A0B4J272 114 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 UBCP0CG48 685 aaKnown RBP14.61□□□□□ -0.07
SORT1-203ENST00000471996 RAP2AP10114 183 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 ARSBP15848 533 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 RSBN1Q5VWQ0 802 aaPredicted RBP14.61□□□□□ -0.07
SORT1-203ENST00000471996 HAPLN4Q86UW8 402 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 LINC00476Q8WZB0 136 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 RBMXL1Q96E39 390 aaKnown RBP14.61□□□□□ -0.07
SORT1-203ENST00000471996 SPACA5Q96QH8 159 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 FAM107BQ9H098 131 aa14.61□□□□□ -0.07
SORT1-203ENST00000471996 MRPS28Q9Y2Q9 187 aaKnown RBP14.61□□□□□ -0.07
SORT1-203ENST00000471996 IGHV4OR15-8A0A075B7B6 117 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 A0A087WW49 117 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 METTL15A6NJ78 407 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 IGLV1-51P01701 117 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 OCM2P0CE71 109 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 OCMP0CE72 109 aaPredicted RBP14.6□□□□□ -0.07
SORT1-203ENST00000471996 SLC2A2P11168 524 aaPredicted RBP14.6□□□□□ -0.07
SORT1-203ENST00000471996 GNGT1P63211 74 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 PAX5Q02548 391 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 DHFR2Q86XF0 187 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 HS3ST5Q8IZT8 346 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 C8orf31Q8N9H6 132 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 FGGYQ96C11 551 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 TBX5Q99593 518 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 ZCCHC4Q9H5U6 513 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 NEK6Q9HC98 313 aa14.6□□□□□ -0.07
SORT1-203ENST00000471996 H2AFY2Q9P0M6 372 aaPredicted RBP14.6□□□□□ -0.07
SORT1-203ENST00000471996 ARL2BPQ9Y2Y0 163 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms