RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PTGFRP43088 359 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 GLP1RP43220 463 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 ZNF134P52741 427 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 RPS11P62280 158 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP48-207ENST00000471752 PAN3Q58A45 887 aaKnown RBP6.39□□□□□ -1.39
USP48-207ENST00000471752 ELP2Q6IA86 826 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 C11orf87Q6NUJ2 197 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 C11orf88Q6PI97 169 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 ZBTB49Q6ZSB9 765 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 RTN4RL2Q86UN3 420 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 SERPINA12Q8IW75 414 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 SAXO1Q8IYX7 474 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 SYS1Q8N2H4 156 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 ZNF485Q8NCK3 441 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 Q8NFD4 153 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 OR5D14Q8NGL3 314 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 TSEN15Q8WW01 171 aaKnown RBP6.39□□□□□ -1.39
USP48-207ENST00000471752 RITA1Q96K30 269 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 FGF20Q9NP95 211 aaPredicted RBP6.39□□□□□ -1.39
USP48-207ENST00000471752 IDI2-AS1Q9NZ38 188 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 PITPNC1Q9UKF7 332 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 DHDHQ9UQ10 334 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 ZNF729A6NN14 1252 aaPredicted RBP6.38□□□□□ -1.39
USP48-207ENST00000471752 C15orf65H3BRN8 121 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 PIN1P1O15428 100 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 PEX14O75381 377 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 ALX3O95076 343 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 BAG2O95816 211 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 FADS2O95864 444 aaKnown RBP6.38□□□□□ -1.39
USP48-207ENST00000471752 CSN2P05814 226 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 RPSAP08865 295 aaKnown RBP6.38□□□□□ -1.39
USP48-207ENST00000471752 OCM2P0CE71 109 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 OCMP0CE72 109 aaPredicted RBP6.38□□□□□ -1.39
USP48-207ENST00000471752 RAB3AP20336 220 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 MTNR1BP49286 362 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 LOXL3P58215 753 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 RAB40BQ12829 278 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 INSL4Q14641 139 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 LRRC36Q1X8D7 754 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 MRPL41Q8IXM3 137 aaKnown RBP6.38□□□□□ -1.39
USP48-207ENST00000471752 OR4D6Q8NGJ1 314 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 GGHQ92820 318 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 DPCDQ9BVM2 203 aaPredicted RBP6.38□□□□□ -1.39
USP48-207ENST00000471752 GAL3ST2Q9H3Q3 398 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 LIN7BQ9HAP6 207 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 PLSCR3Q9NRY6 295 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 GLS2Q9UI32 602 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 ORC6Q9Y5N6 252 aa6.38□□□□□ -1.39
USP48-207ENST00000471752 RYR2Q92736 4967 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 PNMA8CA0A1B0GUJ8 204 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 TMEM212A6NML5 194 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 OGG1O15527 345 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 IL1AP01583 271 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 IGKV1D-33P01593 117 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 IGKV1-33P01594 117 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 MT-ND4P03905 459 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 GNAO1P09471 354 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 IGFBP3P17936 291 aaPredicted RBP6.37□□□□□ -1.39
USP48-207ENST00000471752 CD33P20138 364 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 BRS3P32247 399 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 GBX2P52951 348 aaPredicted RBP6.37□□□□□ -1.39
USP48-207ENST00000471752 PRRX1P54821 245 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 GP2P55259 537 aaKnown RBP6.37□□□□□ -1.39
USP48-207ENST00000471752 RSU1Q15404 277 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 LINC01559Q495D7 138 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 OR52W1Q6IF63 320 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 C8orf86Q6ZUL3 223 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 LYPD6Q86Y78 171 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 PQLC1Q8N2U9 271 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 LINC00482Q8N8I6 264 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 CHST4Q8NCG5 386 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 TMEM104Q8NE00 496 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 PXT1Q8NFP0 134 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 OR4F17Q8NGA8 305 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 OR9G1Q8NH87 305 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 OR1L1Q8NH94 360 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 ZNF596Q8TC21 504 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 GHSRQ92847 366 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 OR4F4Q96R69 305 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 GPER1Q99527 375 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 FAM192AQ9GZU8 254 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 BABAM2Q9NXR7 383 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 ST3GAL6Q9Y274 331 aa6.37□□□□□ -1.39
USP48-207ENST00000471752 TRBV5-5A0A0J9YX44 114 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 ANKRD65E5RJM6 399 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 XPNPEP2O43895 674 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 OR7C1O76099 320 aaPredicted RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 PF4V1P10720 104 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 RCC1P18754 421 aaPredicted RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 SERPINA2P20848 420 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 C21orf33P30042 268 aaPredicted RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 F2RL1P55085 397 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 RBM11P57052 281 aaKnown RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 ADARB1P78563 741 aaKnown RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 HES1Q14469 280 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 DEFB136Q30KP8 78 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 SLC22A6Q4U2R8 563 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms