RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C5P01031 1676 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 EPPINO95925 133 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CD1AP06126 327 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 VDAC1P21796 283 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 COL8A1P27658 744 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GSX2Q9BZM3 304 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF552Q9H707 407 aaPredicted RBP11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CLN8Q9UBY8 286 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 A1L4Q6 167 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GLULP15104 373 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 RPL32P62910 135 aaKnown RBP11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 BAK1Q16611 211 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LAMTOR1Q6IAA8 161 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 RGP1Q92546 391 aaPredicted RBP11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 DIRC2Q96SL1 478 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZFP64Q9NPA5 681 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 OR2A5Q96R48 311 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SH2D2AQ9NP31 389 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IL4P05112 153 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 FAM26EQ8N5C1 309 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SLC25A37Q9NYZ2 338 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 A0A1B0GTH9 108 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LIMS3P0CW19 117 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LIMS4P0CW20 117 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 EIF3IQ13347 325 aaKnown RBP11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CRYGNQ8WXF5 182 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TFAP2AP05549 437 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ANKRD37Q7Z713 158 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 NPAP1Q9NZP6 1156 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CDIPTO14735 213 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PSCAO43653 123 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CLDN18P56856 261 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF735P0CB33 412 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CCL4P13236 92 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 HIST1H1BP16401 226 aaKnown RBP11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 INSL4Q14641 139 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TNFSF14O43557 240 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SFTPCP11686 197 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF137PP52743 207 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SUMO2P61956 95 aaKnown RBP11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 Q8WTZ3 238 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 RHNO1Q9BSD3 238 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 RASL12Q9NYN1 266 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CD96P40200 585 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 RPEL1Q2QD12 228 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PELI3Q8N2H9 469 aa11.72□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZAR1LA6NP61 321 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ASB5Q8WWX0 329 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GPA33Q99795 319 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPE3 182 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNHIT1O43257 154 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF117Q03924 483 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PSG5Q15238 335 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MMDQ15546 238 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LINC00303Q3SY05 128 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CLLU1Q5K131 121 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZBTB44Q8NCP5 570 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 METTL26Q96S19 204 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LHX9Q9NQ69 397 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CYSLTR2Q9NS75 346 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LRP6O75581 1613 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PSMB11A5LHX3 300 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CST4P01036 141 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SFTA3P0C7M3 94 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CD1EP15812 388 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SUCLG1P53597 346 aaKnown RBP11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TINAGQ9UJW2 476 aa11.71□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SKP2Q13309 424 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 ZNF324BQ6AW86 544 aaPredicted RBP11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CENPVQ7Z7K6 275 aaPredicted RBP11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OTOSQ8NHW6 89 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PATE3B3GLJ2 98 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 HIKESHIQ53FT3 197 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PRNTQ86SH4 94 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR10J6PQ8NGY7 276 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 HARBI1Q96MB7 349 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TEX101Q9BY14 249 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PRO1933Q9H354 126 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 WDR25Q64LD2 544 aaPredicted RBP11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SPNS1Q9H2V7 528 aa11.71□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 FAM78BQ5VT40 261 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 ZG16BQ96DA0 208 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 LRRK1Q38SD2 2015 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 LINC01387J3KSC0 135 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 DYNLT3P51808 116 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms