RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PAN3Q58A45 887 aaKnown RBP8.13□□□□□ -1.11
SF3A1-207ENST00000471342 TMEM69Q5SWH9 247 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PYHIN1Q6K0P9 492 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 HOGA1Q86XE5 327 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 MAPK1IP1LQ8NDC0 245 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 OR4K15Q8NH41 348 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 MAFIPQ8WZ33 124 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 NEIL1Q96FI4 390 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-207ENST00000471342 AJUBAQ96IF1 538 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 TOLLIPQ9H0E2 274 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PARP12Q9H0J9 701 aaKnown RBP8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PCDHB16Q9NRJ7 776 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PLEKHJ1Q9NW61 149 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 MYO9AB2RTY4 2548 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 YLPM1P49750 1951 aaKnown RBP8.12□□□□□ -1.11
SF3A1-207ENST00000471342 ODAMA1E959 279 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 METTL21EPA6NDL7 271 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 C17orf98A8MV24 154 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 C12orf77C9JDV5 145 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 PROP1O75360 226 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 CD74P04233 296 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 SCTP09683 121 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 CD3GP09693 182 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 IGHV4-31P0DP07 118 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 IRF2P14316 349 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 CCL3L1P16619 93 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 BTCP35070 178 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 KCNJ3P48549 501 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 PPP5CP53041 499 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF45Q02386 682 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 GRK1Q15835 563 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 NKAPLQ5M9Q1 402 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 ATAD3CQ5T2N8 411 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 MUC20Q8N307 709 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-207ENST00000471342 OR4D10Q8NGI6 311 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 MED30Q96HR3 178 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 Q96MF0 132 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 S100A13Q99584 98 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 REG4Q9BYZ8 158 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 NARFLQ9H6Q4 476 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 SPACA1Q9HBV2 294 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 SLC25A10Q9UBX3 287 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-207ENST00000471342 MIOXQ9UGB7 285 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 OPN4Q9UHM6 478 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 RPUSD1Q9UJJ7 312 aaKnown RBP8.12□□□□□ -1.11
SF3A1-207ENST00000471342 TBC1D24Q9ULP9 559 aa8.12□□□□□ -1.11
SF3A1-207ENST00000471342 KIR2DS1A0A191URI9 304 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 MEIS3P1A6NDR6 274 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 FAM25CB3EWG5 89 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 FAM25GB3EWG6 89 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 MCRIP1C9JLW8 97 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 GABARAPH6UMI1 98 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 SULT1C2O00338 296 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 HEXAP06865 529 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 GSTT2P0CG29 244 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 GSTT2BP0CG30 244 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 SLC25A16P16260 332 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 USF1P22415 310 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-207ENST00000471342 DTYMKP23919 212 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 CD40LGP29965 261 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 PAX8Q06710 450 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 OR52W1Q6IF63 320 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 CLEC2AQ6UVW9 174 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 BTN2A1Q7KYR7 527 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 SPICQ8N5J4 248 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 C5orf30Q96GV9 206 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 NEDD4LQ96PU5 975 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 CABLES2Q9BTV7 478 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 SIRPDQ9H106 197 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 DIABLOQ9NR28 239 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 ETAA1Q9NY74 926 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 MRPS7Q9Y2R9 242 aaKnown RBP8.11□□□□□ -1.11
SF3A1-207ENST00000471342 CR1P17927 2039 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 TEX15Q9BXT5 2789 aa8.11□□□□□ -1.11
SF3A1-207ENST00000471342 ANKRD20A5PA0PJZ0 165 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 F2RL2O00254 374 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 SCGNO76038 276 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 FSHBP01225 129 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 IGLV2-14P01704 120 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 FCER2P06734 321 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 LPLP06858 475 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 IL7P13232 177 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 RPS2P15880 293 aaKnown RBP8.1□□□□□ -1.11
SF3A1-207ENST00000471342 SSTR5P35346 364 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF134P52741 427 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 CARTPTQ16568 116 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 C11orf91Q3C1V1 193 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 IGSF11Q5DX21 431 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 KRBOX4Q5JUW0 171 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 FAM131AQ6UXB0 335 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 SLC36A1Q7Z2H8 476 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 GDPD1Q8N9F7 314 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 ASCC1Q8N9N2 400 aaKnown RBP8.1□□□□□ -1.11
SF3A1-207ENST00000471342 TMEM185AQ8NFB2 350 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 OR5D13Q8NGL4 314 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 OR1L1Q8NH94 360 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms