RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 HERPUD1Q15011 391 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 MST1LQ2TV78 715 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 TEX36Q5VZQ5 186 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 SLC35E4Q6ICL7 350 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 C20orf204Q6ZNR8 217 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 C17orf107Q6ZR85 190 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 LYG2Q86SG7 212 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 MUC20Q8N307 709 aaPredicted RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 SPICQ8N5J4 248 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 CD177Q8N6Q3 437 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 TMEM185AQ8NFB2 350 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 OR11H7Q8NGC8 314 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 OR52B4Q8NGK2 314 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 OR4A4PQ8NGN8 299 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 MOB3AQ96BX8 217 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 LIME1Q9H400 295 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 C5orf66Q9H5L9 145 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 SAP30LQ9HAJ7 183 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 RANGRFQ9HD47 186 aaPredicted RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 FBXO9Q9UK97 447 aaPredicted RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 RP1L1Q8IWN7 2480 aaPredicted RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 TK1P04183 234 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 CTSDP07339 412 aaPredicted RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 SCTP09683 121 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 ANXA3P12429 323 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 MUC1P15941 1255 aaPredicted RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 IGFBP2P18065 325 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 CXCL3P19876 107 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 ZBTB25P24278 435 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 FCGR2CP31995 323 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 EIF2B2P49770 351 aaKnown RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 PPOXP50336 477 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 UCP3P55916 312 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 DHODHQ02127 395 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 PPP1R1AQ13522 171 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 HMGN3Q15651 99 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 TMEM128Q5BJH2 165 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 IGSF11Q5DX21 431 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 STUMQ69YW2 141 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 C1orf87Q8N0U7 546 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 MUC15Q8N387 334 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 ASCC1Q8N9N2 400 aaKnown RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 BOLLQ8N9W6 283 aaKnown RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 ADAD2Q8NCV1 583 aaKnown RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 ANGPTL6Q8NI99 470 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 PPP1R35Q8TAP8 253 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 ZFAND1Q8TCF1 268 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 TMEM230Q96A57 120 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 SDSLQ96GA7 329 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 COQ2Q96H96 371 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 SNX22Q96L94 193 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 BBC3Q96PG8 261 aaPredicted RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 TRAF4Q9BUZ4 470 aaPredicted RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 TRAPPC2LQ9UL33 140 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 PCDHB10Q9UN67 800 aa7.86□□□□□ -1.15
VPS52-216ENST00000471309 C14orf166Q9Y224 244 aaKnown RBP7.86□□□□□ -1.15
VPS52-216ENST00000471309 IGSF10Q6WRI0 2623 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 IGHV3OR15-7A0A075B7D8 119 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 TRBV6-7A0A0A0MS04 114 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 IGKV1-6A0A0C4DH72 117 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 OOEPA6NGQ2 149 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 TUSC2O75896 110 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 DUS4LO95620 317 aaKnown RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 CYB5R3P00387 301 aaPredicted RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 PPYP01298 95 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 ZNF728P0DKX0 622 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 PGAM2P15259 253 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 AKR1C4P17516 323 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 RCC1P18754 421 aaPredicted RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 AADACP22760 399 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 HERV-K104P61576 105 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 BAMBIQ13145 260 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 ZFP69Q49AA0 526 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 C6orf183Q5T699 404 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 TRAT1Q6PIZ9 186 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 SLC38A6Q8IZM9 456 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 ZNF561Q8N587 486 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 C12orf45Q8N5I9 185 aaPredicted RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 OR2AK2Q8NG84 335 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 OR5T2Q8NGG2 359 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 MITD1Q8WV92 249 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 FYTTD1Q96QD9 318 aaKnown RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 RTBDNQ9BSG5 229 aaPredicted RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 ZNF436Q9C0F3 470 aaPredicted RBP7.85□□□□□ -1.15
VPS52-216ENST00000471309 SHARPINQ9H0F6 387 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 FAM234AQ9H0X4 552 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 NCOR1P1Q9H4R4 102 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 KCNIP1Q9NZI2 227 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 MGAT4CQ9UBM8 478 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 SLC23A1Q9UHI7 598 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 KIF25Q9UIL4 384 aa7.85□□□□□ -1.15
VPS52-216ENST00000471309 HELZ2Q9BYK8 2649 aaKnown RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 A0A0B4J2A0 478 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 FAM172BPA6NC97 362 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 NKX6-3A6NJ46 265 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 C12orf77C9JDV5 145 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 TMEM178BH3BS89 294 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms