RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 MOGAT3Q86VF5 341 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 OR1L8Q8NGR8 309 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 OR10AG1Q8NH19 301 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 A0A1B0GV72 72 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RBMY1BA6NDE4 496 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RBMY1EA6NEQ0 496 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 UNCXA6NJT0 531 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HSPB2A8KAH6 182 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PF4P02776 101 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RBMY1DP0C7P1 496 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RBMY1A1P0DJD3 496 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RBMY1CP0DJD4 496 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 NPPBP16860 134 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 DUSP8Q13202 625 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HSPB2Q16082 182 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 OR1P1Q8NH06 330 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 LSM10Q969L4 123 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PGLYRP4Q96LB8 373 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PRELID3AQ96N28 172 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 GPR27Q9NS67 375 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 JKAMPQ9P055 326 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 BCORQ6W2J9 1755 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 A0A1B0GUL6 1792 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 K7ESM1 405 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 CXorf1O96002 111 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PF4V1P10720 104 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 MDKP21741 143 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 EVX1P49640 407 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 SPRED3Q2MJR0 410 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 SYS1Q8N2H4 156 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 DOK1Q99704 481 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PAXXQ9BUH6 204 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 TUBA4BQ9H853 241 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 MRPL16Q9NX20 251 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HIST1H1DP16402 221 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 MMDQ15546 238 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 KISS1Q15726 138 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 ZBTB37Q5TC79 503 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 AFMIDQ63HM1 303 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 UBALD2Q8IYN6 164 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 SPICQ8N5J4 248 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 ZDHHC22Q8N966 263 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RNASEH2CQ8TDP1 164 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 ABHD14BQ96IU4 210 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HEXA-AS1Q9H8Q6 139 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 TOMM7Q9P0U1 55 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 THAP10Q9P2Z0 257 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HDGFL3Q9Y3E1 203 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 MYH10P35580 1976 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HBZP02008 142 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 CRHP06850 196 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PRF1P14222 555 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PRDX2P32119 198 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 RNPS1Q15287 305 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 CTF1Q16619 201 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 CFAP161Q6P656 301 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 ARRDC1Q8N5I2 433 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 ZG16BQ96DA0 208 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 TSPAN32Q96QS1 320 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 CDC42EP3Q9UKI2 254 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 MICAL3Q7RTP6 2002 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF646O15015 1829 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-210ENST00000471181 HMX2A2RU54 273 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 ABLIM3O94929 683 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 MBPP02686 304 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PMELP40967 661 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 CX3CL1P78423 397 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PNRC1Q12796 327 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PABPC1L2AQ5JQF8 200 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 TSPO2Q5TGU0 170 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 RTL10Q7L3V2 364 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 OR1K1Q8NGR3 316 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 LMO3Q8TAP4 145 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PP6455Q8WZ26 134 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 HARBI1Q96MB7 349 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 HSPB9Q9BQS6 159 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 FAM206AQ9NX38 181 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 OR51B2Q9Y5P1 312 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM202A6NGA9 273 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 C1QTNF9BB2RNN3 333 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 IGKV3-20P01619 116 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 FCARP24071 287 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 HYAL1Q12794 435 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 SAMD13Q5VXD3 122 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PRSS54Q6PEW0 395 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 DEFB123Q8N688 67 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 VN1R2Q8NFZ6 395 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 SPSB1Q96BD6 273 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 YIPF6Q96EC8 236 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 C4orf45Q96LM5 186 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 TOX2Q96NM4 488 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 VAX2Q9UIW0 290 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 ZDHHC8Q9ULC8 765 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 TRAV17A0A0B4J275 112 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 A0A1W2PPE3 182 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PGA4P0DJD7 388 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PGA5P0DJD9 388 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 MYOGP15173 224 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms