RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 IGHV3OR15-7A0A075B7D8 119 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 C17orf100A8MU93 164 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 PLAUP00749 431 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 TK1P04183 234 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 ZNF728P0DKX0 622 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 PSG2P11465 335 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 AADACP22760 399 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 GZMKP49863 264 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 CCL8P80075 99 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 ZCCHC24Q8N2G6 241 aaKnown RBP15.24■□□□□ 0.03
SMC4-211ENST00000469858 CD177Q8N6Q3 437 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 MITD1Q8WV92 249 aa15.24■□□□□ 0.03
SMC4-211ENST00000469858 KALRNO60229 2985 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 KIAA2026Q5HYC2 2103 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 IGKV1-6A0A0C4DH72 117 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 IFNL4K9M1U5 179 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 H2BFSP57053 126 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 HERV-K104P61576 105 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 DHODHQ02127 395 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 TFF3Q07654 80 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 BEX5Q5H9J7 111 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 MOB1BQ7L9L4 216 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 ASCC1Q8N9N2 400 aaKnown RBP15.23■□□□□ 0.03
SMC4-211ENST00000469858 OR2T35Q8NGX2 323 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 MOB3AQ96BX8 217 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 ZNF486Q96H40 463 aaPredicted RBP15.23■□□□□ 0.03
SMC4-211ENST00000469858 PHB2Q99623 299 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 PIPOXQ9P0Z9 390 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 RNF115Q9Y4L5 304 aa15.23■□□□□ 0.03
SMC4-211ENST00000469858 SIAH2O43255 324 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 DUS4LO95620 317 aaKnown RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 LHBP01229 141 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 PPYP01298 95 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 CTSDP07339 412 aaPredicted RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 GIPP09681 153 aaPredicted RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 ERP29P30040 261 aaKnown RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 PRDX2P32119 198 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 SLC9A3R2Q15599 337 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 C4orf17Q53FE4 359 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 FAM201AQ5SY85 155 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 DCAF12L2Q5VW00 463 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 FAM90A1Q86YD7 464 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 GAPTQ8N292 157 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 ZFAND1Q8TCF1 268 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 WDR89Q96FK6 387 aaPredicted RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 DIRC2Q96SL1 478 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 RNF7Q9UBF6 113 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 PKDREJQ9NTG1 2253 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 IGKV1D-17A0A075B6S4 117 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 TMEM30CPA0ZSE6 113 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 ZG16O60844 167 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 CTXN2P0C2S0 81 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 CD80P33681 288 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 GABRA2P47869 451 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 OR3A1P47881 315 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 SUPT4H1P63272 117 aaKnown RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 AESQ08117 197 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 KCTD9Q7L273 389 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 PRR18Q8N4B5 295 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 GALNT11Q8NCW6 608 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 OR4A4PQ8NGN8 299 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 KIRREL1Q96J84 757 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 DHRS9Q9BPW9 319 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 CLEC4MQ9H2X3 399 aaPredicted RBP15.22■□□□□ 0.03
SMC4-211ENST00000469858 PPP1R3CQ9UQK1 317 aa15.22■□□□□ 0.03
SMC4-211ENST00000469858 OR2A4O95047 310 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 SFT2D2O95562 160 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 CYB5R3P00387 301 aaPredicted RBP15.21■□□□□ 0.03
SMC4-211ENST00000469858 ADH4P08319 380 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 CLEC18BQ6UXF7 455 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 IL1F10Q8WWZ1 152 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 HYLS1Q96M11 299 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 OR2A7Q96R45 310 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 TRAF4Q9BUZ4 470 aaPredicted RBP15.21■□□□□ 0.03
SMC4-211ENST00000469858 RANBP3Q9H6Z4 567 aaPredicted RBP15.21■□□□□ 0.03
SMC4-211ENST00000469858 DYNLRB1Q9NP97 96 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 KIF25Q9UIL4 384 aa15.21■□□□□ 0.03
SMC4-211ENST00000469858 RAI1Q7Z5J4 1906 aaPredicted RBP15.2■□□□□ 0.02
SMC4-211ENST00000469858 ANKHD1Q8IWZ3 2542 aaKnown RBP15.2■□□□□ 0.02
SMC4-211ENST00000469858 POM121CA8CG34 1229 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 CCSO14618 274 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 DIRAS3O95661 229 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 CD55P08174 381 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 TNFRSF1AP19438 455 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 DNASE1P24855 282 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 APOBEC3AP31941 199 aaPredicted RBP15.2■□□□□ 0.02
SMC4-211ENST00000469858 RAP2BP61225 183 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 ABCA11PQ4W5N1 156 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 TGIF2LYQ8IUE0 185 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 OR11L1Q8NGX0 322 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 UBALD1Q8TB05 177 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 ERGIC1Q969X5 290 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 COQ2Q96H96 371 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 MBNL3Q9NUK0 354 aaKnown RBP15.2■□□□□ 0.02
SMC4-211ENST00000469858 CISD1Q9NZ45 108 aaKnown RBP15.2■□□□□ 0.02
SMC4-211ENST00000469858 PRR13Q9NZ81 148 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 MGAT4AQ9UM21 535 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 BOLA1Q9Y3E2 137 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 DSCAMO60469 2012 aa15.2■□□□□ 0.02
SMC4-211ENST00000469858 IRF2P14316 349 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms