RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MGAT4AQ9UM21 535 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 PDZD2O15018 2839 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 DSCAML1Q8TD84 2053 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 TMEM30CPA0ZSE6 113 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 UBE2QL1A1L167 161 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 NPIPB11E5RHQ5 1161 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 GYPAP02724 150 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 CSF1P09603 554 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF735P0CB33 412 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 GSTT2BP0CG30 244 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 SNU13P55769 128 aaKnown RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 P2RX3P56373 397 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DSCR9P59020 149 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 AP3S2P59780 193 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 MEF2CQ06413 473 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ARFRP1Q13795 201 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 HMGN3Q15651 99 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF660Q6AZW8 331 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 PRSS57Q6UWY2 283 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 LYPD2Q6UXB3 125 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 SLC36A1Q7Z2H8 476 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 PEG10Q86TG7 708 aaKnown RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 BPIFB2Q8N4F0 458 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 GVQW1Q8N7I0 195 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 BOLLQ8N9W6 283 aaKnown RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 C19orf18Q8NEA5 215 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DEFB108BQ8NET1 73 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 TIMD4Q96H15 378 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 LURAP1Q96LR2 239 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 CCL13Q99616 98 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 HDHD3Q9BSH5 251 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 CABLES2Q9BTV7 478 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 PPA2Q9H2U2 334 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 PATZ1Q9HBE1 687 aaKnown RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 SLC2A8Q9NY64 477 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 MIOXQ9UGB7 285 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 POLR3KQ9Y2Y1 108 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 NAV2Q8IVL1 2488 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 IGKV1D-8A0A087WSZ0 117 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 A0A096LNT2 108 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 A0A1B0GW55 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ODAMA1E959 279 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 FUOMA2VDF0 154 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 NAP1L6A6NFF2 107 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 NKX6-3A6NJ46 265 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 A8MXK9 166 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF205O95201 554 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 TFF1P04155 84 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L2P0CJ85 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L3P0CJ86 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L4P0CJ87 422 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L5P0CJ88 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L6P0CJ89 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L7P0CJ90 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 SELLP14151 372 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 BTCP35070 178 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 NPY4RP50391 375 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 PDLIM4P50479 330 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 TAS2R19P59542 299 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 GMFBP60983 142 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 LMO4P61968 165 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 GRK1Q15835 563 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ACTBL2Q562R1 376 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 TRIQKQ629K1 86 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4L9Q6RFH8 374 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-204ENST00000469232 TCF23Q7RTU1 214 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 OVCH2Q7RTZ1 564 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 SPICQ8N5J4 248 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 FAM216BQ8N7L0 139 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ZNRF1Q8ND25 227 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 LY6G5BQ8NDX9 201 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUSP18Q8NEJ0 188 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 BEST4Q8NFU0 473 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 NRGNQ92686 78 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 C1orf159Q96HA4 380 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 HRASLSQ9HDD0 168 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ABCB10Q9NRK6 738 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 DUX4Q9UBX2 424 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ANXA10Q9UJ72 324 aa6.76□□□□□ -1.33
NPHP3-204ENST00000469232 ITPR2Q14571 2701 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 TRBV23-1A0A0A0MS06 115 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 IGKV1-6A0A0C4DH72 117 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 KIR2DS1A0A191URI9 304 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 TUSC2O75896 110 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 SLC6A1P30531 599 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 KIR2DS4P43632 304 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 GPR6P46095 362 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-204ENST00000469232 GABRA2P47869 451 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 GLIPR1P48060 266 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 RFX2P48378 723 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 ATP5J2P56134 94 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 DLX6P56179 175 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 TAS2R46P59540 309 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 KIR2DS1Q14954 304 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 OXA1LQ15070 435 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 DEFB113Q30KQ7 82 aa6.75□□□□□ -1.33
NPHP3-204ENST00000469232 PLA1AQ53H76 456 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms