RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 C3AR1Q16581 482 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 C6orf15Q6UXA7 325 aaPredicted RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 CPEB2Q7Z5Q1 589 aaKnown RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 HES7Q9BYE0 225 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 CENPMQ9NSP4 180 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 FUT9Q9Y231 359 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 IER3IP1Q9Y5U9 82 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 GP1BBP13224 206 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 HOXB9P17482 250 aaPredicted RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 AZU1P20160 251 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 PSMB10P40306 273 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 PRSS12P56730 875 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 ERVS71-1P61550 626 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 TMEM176BQ3YBM2 270 aaPredicted RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 TMEM225Q6GV28 225 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 C9orf40Q8IXQ3 194 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 ZNF679Q8IYX0 411 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 OR2T33Q8NG76 320 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 OR2Z1Q8NG97 314 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 C4orf36Q96KX1 117 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 GPA33Q99795 319 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 C19orf25Q9UFG5 118 aaPredicted RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 FREM3P0C091 2139 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 A0A087WWC5 75 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 RBFOX2O43251 390 aaKnown RBP eCLIP8.68□□□□□ -1.02
NUP50-214ENST00000469163 CT45A8P0DMV1 189 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 CT45A9P0DMV2 189 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 LMO1P25800 156 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 GABRA2P47869 451 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 CT45A2Q5DJT8 189 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 SLC23A3Q6PIS1 610 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 DNM1P34Q6PK57 102 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 FAM220AQ7Z4H9 259 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 RTN4RL2Q86UN3 420 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 TMEM99Q8N816 258 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 GPR146Q96CH1 333 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 MRPL13Q9BYD1 178 aaKnown RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 MRPS18AQ9NVS2 196 aaKnown RBP8.68□□□□□ -1.02
NUP50-214ENST00000469163 P4HTMQ9NXG6 502 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 MTFP1Q9UDX5 166 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 LRP12Q9Y561 859 aa8.68□□□□□ -1.02
NUP50-214ENST00000469163 ARRDC5A6NEK1 342 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 PROB1E7EW31 1015 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 FAHP16930 419 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 ARL3P36405 182 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 CSNK1A1P48729 337 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RPL23AP62750 156 aaKnown RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 GNB2P62879 340 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 ARG2P78540 354 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 PPP1R1AQ13522 171 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 ABHD17BQ5VST6 288 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RPS19BP1Q86WX3 136 aaKnown RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 CLEC1AQ8NC01 280 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 BHLHE23Q8NDY6 225 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 FAM213BQ8TBF2 198 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RASD2Q96D21 266 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 BTF3L4Q96K17 158 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 ANGPTL4Q9BY76 406 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RTN4RQ9BZR6 473 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 MAGT1Q9H0U3 335 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 SMPXQ9UHP9 88 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RNF115Q9Y4L5 304 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RELNP78509 3460 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 TRAV18A0A075B6X5 111 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 SERINC4A6NH21 518 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 ZFAND5O76080 213 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 DUS4LO95620 317 aaKnown RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 ADAM8P78325 824 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 SLC17A1Q14916 467 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 ZNF260Q3ZCT1 412 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 DND1Q8IYX4 353 aaKnown RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 OR2L13Q8N349 312 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 CT55Q8WUE5 264 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 C11orf40Q8WZ69 217 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 DEFB127Q9H1M4 99 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 PSG11Q9UQ72 335 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 FER1L5A0AVI2 2057 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 H0YIZ8 118 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 CDC42EP2O14613 210 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 PPP1CCP36873 323 aaKnown RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 PDLIM4P50479 330 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 CTXN1P60606 82 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 EIPR1Q53HC9 387 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RHBDD2Q6NTF9 364 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 WDR74Q6RFH5 385 aaPredicted RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 ASB10Q8WXI3 467 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 NMNAT3Q96T66 252 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 RNF126Q9BV68 326 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 PHF3Q92576 2039 aaKnown RBP8.67□□□□□ -1.02
NUP50-214ENST00000469163 NBEAQ8NFP9 2946 aa8.67□□□□□ -1.02
NUP50-214ENST00000469163 FBLL1A6NHQ2 334 aaKnown RBP8.66□□□□□ -1.02
NUP50-214ENST00000469163 CHRM2P08172 466 aa8.66□□□□□ -1.02
NUP50-214ENST00000469163 RAB40ALP0C0E4 278 aa8.66□□□□□ -1.02
NUP50-214ENST00000469163 GDF1P27539 372 aa8.66□□□□□ -1.02
NUP50-214ENST00000469163 SUMO1P63165 101 aaKnown RBP8.66□□□□□ -1.02
NUP50-214ENST00000469163 CSNK2A1P68400 391 aaPredicted RBP8.66□□□□□ -1.02
NUP50-214ENST00000469163 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
NUP50-214ENST00000469163 TMEM205Q6UW68 189 aa8.66□□□□□ -1.02
NUP50-214ENST00000469163 CSNK2A3Q8NEV1 391 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms