RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 CARHSP1Q9Y2V2 147 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 SNX24Q9Y343 169 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 ASB4Q9Y574 426 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 ARL5AQ9Y689 179 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 USH1CQ9Y6N9 552 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 DICER1Q9UPY3 1922 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 KIF13BQ9NQT8 1826 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 ZNF532Q9HCE3 1301 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 ZNF106Q9H2Y7 1883 aaKnown RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 UNC79Q9P2D8 2635 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RIMS1Q86UR5 1692 aaKnown RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 BICRAQ9NZM4 1560 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 SNAPC4Q5SXM2 1469 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CITO14578 2027 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 TRAV8-7A0A075B6U6 113 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 VPS37CA5D8V6 355 aaPredicted RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 SMIM9A6NGZ8 99 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RFPL4AA6NLU0 287 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 NCBP2LA6PVI3 153 aaKnown RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 FTCDNL1E5RQL4 147 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RFPL4AL1F8VTS6 287 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 M0QZK8 103 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 KCNK1O00180 336 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 UBDO15205 165 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 HPGDSO60760 199 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 ATP6V1G2O95670 118 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 IGHV3-11P01762 117 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 C8orf88P0DMB2 117 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CT45A6P0DMU7 189 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CT45A5P0DMU8 189 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CT45A7P0DMV0 189 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CD37P11049 281 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 GFAPP14136 432 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 UCHL3P15374 230 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 UGT2B7P16662 529 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 ADORA1P30542 326 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 S100A7P31151 101 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 MAGEA12P43365 314 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RPL5P46777 297 aaKnown RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 GABRA4P48169 554 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 TAS2R39P59534 338 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RPL19P84098 196 aaKnown RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 PDZD11Q5EBL8 140 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CT45A1Q5HYN5 189 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 TRIQKQ629K1 86 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 TMEM42Q69YG0 159 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 Q6ZT83 130 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 HORMAD1Q86X24 394 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 OR52E2Q8NGJ4 325 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 OR10K1Q8NGX5 313 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 OR51F2Q8NH61 342 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 OR51A7Q8NH64 312 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 CT45A3Q8NHU0 189 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 ITFG1Q8TB96 612 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 SFXN5Q8TD22 340 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 EEF1AKMT3Q96AZ1 226 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 TCEAL4Q96EI5 215 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 Q96MT0 163 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RILPQ96NA2 401 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 PPP1R2P1Q96PQ5 205 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 GPR22Q99680 433 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 RDH14Q9HBH5 336 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 C21orf62Q9NYP8 219 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 FARSAQ9Y285 508 aaKnown RBP2.41□□□□□ -2.02
XRN1-207ENST00000468894 SIGLEC7Q9Y286 467 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 ARL2BPQ9Y2Y0 163 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 NUBP2Q9Y5Y2 271 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 WDR97A6NE52 1622 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 DYSFO75923 2080 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 MROH7Q68CQ1 1323 aa2.41□□□□□ -2.02
XRN1-207ENST00000468894 WDR7Q9Y4E6 1490 aa2.4□□□□□ -2.02
XRN1-207ENST00000468894 COL22A1Q8NFW1 1626 aaPredicted RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 TGIF2-C20orf24A0A0A6YYL0 155 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 A0A0B4J2E0 115 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 TINCRA0A1B0GVN0 87 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 A0A1B0GX12 115 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 CST8O60676 142 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 EIF1BO60739 113 aaKnown RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 PFDN1O60925 122 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 IFNA16P05015 189 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 LIPCP11150 499 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 CSNK2A2P19784 350 aaPredicted RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 PSMA1P25786 263 aaKnown RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 GRPRP30550 384 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 EIF1P41567 113 aaKnown RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 AP2S1P53680 142 aaPredicted RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 AQP5P55064 265 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 STXBP1P61764 594 aaKnown RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 SLC35B1P78383 322 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 TFAMQ00059 246 aaKnown RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 FUT5Q11128 374 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 POU6F1Q14863 301 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 RBMY1FQ15415 496 aaKnown RBP2.4□□□□□ -2.03
XRN1-207ENST00000468894 SPA17Q15506 151 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 MED27Q6P2C8 311 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 CD200R1LQ6Q8B3 271 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 TMED4Q7Z7H5 227 aa2.4□□□□□ -2.03
XRN1-207ENST00000468894 LRP11Q86VZ4 500 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms