RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ZFP69Q49AA0 526 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 TCTE3Q8IZS6 198 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 LILRB1Q8NHL6 650 aaPredicted RBP15.92■□□□□ 0.14
SMC4-209ENST00000468653 LIME1Q9H400 295 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 C5orf66Q9H5L9 145 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 SAP30LQ9HAJ7 183 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 MGAT4CQ9UBM8 478 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 MGAT4AQ9UM21 535 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 C14orf166Q9Y224 244 aaKnown RBP15.92■□□□□ 0.14
SMC4-209ENST00000468653 IGSF10Q6WRI0 2623 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 IGKV1D-17A0A075B6S4 117 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 TMEM30CPA0ZSE6 113 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 CYB5R3P00387 301 aaPredicted RBP15.92■□□□□ 0.14
SMC4-209ENST00000468653 TK1P04183 234 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 ANXA3P12429 323 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 PI3P19957 117 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 VAMP1P23763 118 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 KCNJ3P48549 501 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 HLA-DRB3P79483 266 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 PPP1R1AQ13522 171 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 MST1LQ2TV78 715 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 C5orf24Q7Z6I8 188 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 LYG2Q86SG7 212 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 GAPTQ8N292 157 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 TMEM185AQ8NFB2 350 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 RTBDNQ9BSG5 229 aaPredicted RBP15.92■□□□□ 0.14
SMC4-209ENST00000468653 TMEM204Q9BSN7 226 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 SEBOXQ9HB31 216 aaPredicted RBP15.92■□□□□ 0.14
SMC4-209ENST00000468653 METRNQ9UJH8 293 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 ADGRG4Q8IZF6 3080 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 HCFC1P51610 2035 aa15.92■□□□□ 0.14
SMC4-209ENST00000468653 TRAV39A0A0B4J263 110 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 LRRC30A6NM36 301 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 NFYAP23511 347 aaPredicted RBP15.91■□□□□ 0.14
SMC4-209ENST00000468653 ZBTB25P24278 435 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 LOXP28300 417 aaPredicted RBP15.91■□□□□ 0.14
SMC4-209ENST00000468653 OR3A1P47881 315 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 FXYD4P59646 89 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 UBE2MP61081 183 aaKnown RBP15.91■□□□□ 0.14
SMC4-209ENST00000468653 HERV-K104P61576 105 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 IL13RA1P78552 427 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 FAM201AQ5SY85 155 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 SLC35E4Q6ICL7 350 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 C12orf45Q8N5I9 185 aaPredicted RBP15.91■□□□□ 0.14
SMC4-209ENST00000468653 OR4A4PQ8NGN8 299 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 ZFAND1Q8TCF1 268 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 TOMM40LQ969M1 308 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 CACNA1DQ01668 2161 aa15.91■□□□□ 0.14
SMC4-209ENST00000468653 MEIKINA0A087WXM9 373 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 C9orf170A2RU37 121 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 ZNF728P0DKX0 622 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 AESQ08117 197 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 TMEM128Q5BJH2 165 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 MUC15Q8N387 334 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 SPICQ8N5J4 248 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 SLC23A1Q9UHI7 598 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 B8ZZF3 427 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 DIRAS3O95661 229 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 AADACP22760 399 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 HERPUD1Q15011 391 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 OR2AK2Q8NG84 335 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 PPP1R35Q8TAP8 253 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 MOB3AQ96BX8 217 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 ZNF436Q9C0F3 470 aaPredicted RBP15.9■□□□□ 0.14
SMC4-209ENST00000468653 KCNIP1Q9NZI2 227 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 KIF25Q9UIL4 384 aa15.9■□□□□ 0.14
SMC4-209ENST00000468653 PRB1P04280 392 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 CTSDP07339 412 aaPredicted RBP15.89■□□□□ 0.13
SMC4-209ENST00000468653 CD34P28906 385 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 SNRPD2P62316 118 aaKnown RBP15.89■□□□□ 0.13
SMC4-209ENST00000468653 KRBOX4Q5JUW0 171 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 TGIF2LYQ8IUE0 185 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 CASTOR1Q8WTX7 329 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 FAM222BQ8WU58 562 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 TMEM230Q96A57 120 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 KIRREL1Q96J84 757 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 SNX22Q96L94 193 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 FXYD6Q9H0Q3 95 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 CLEC4MQ9H2X3 399 aaPredicted RBP15.89■□□□□ 0.13
SMC4-209ENST00000468653 MBNL3Q9NUK0 354 aaKnown RBP15.89■□□□□ 0.13
SMC4-209ENST00000468653 PCDHB10Q9UN67 800 aa15.89■□□□□ 0.13
SMC4-209ENST00000468653 IGKV1-6A0A0C4DH72 117 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 FAM172BPA6NC97 362 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 ZNF737O75373 536 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 PPYP01298 95 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 NKX2-5P52952 324 aaPredicted RBP15.88■□□□□ 0.13
SMC4-209ENST00000468653 SWI5Q1ZZU3 235 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 PRR18Q8N4B5 295 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 DEFB108BQ8NET1 73 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 OR10J5Q8NHC4 309 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 ANGPTL6Q8NI99 470 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 IL1F10Q8WWZ1 152 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 COQ2Q96H96 371 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 BBC3Q96PG8 261 aaPredicted RBP15.88■□□□□ 0.13
SMC4-209ENST00000468653 SHARPINQ9H0F6 387 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 PKDREJQ9NTG1 2253 aa15.88■□□□□ 0.13
SMC4-209ENST00000468653 GOSR2O14653 212 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 DHODHQ02127 395 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 C11orf88Q6PI97 169 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 C1orf87Q8N0U7 546 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms