RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 C2orf80Q0P641 193 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 SKP2Q13309 424 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 NNATQ16517 81 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 CEP55Q53EZ4 464 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 SPANXN2Q5MJ10 180 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 INO80EQ8NBZ0 244 aaPredicted RBP-0.3□□□□□ -2.46
SSB-208ENST00000468600 C16orf78Q8WTQ4 265 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 CCL17Q92583 94 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 TSNAXQ99598 290 aaKnown RBP-0.3□□□□□ -2.46
SSB-208ENST00000468600 ALX4Q9H161 411 aaPredicted RBP-0.3□□□□□ -2.46
SSB-208ENST00000468600 APCP25054 2843 aa-0.3□□□□□ -2.46
SSB-208ENST00000468600 SYNE1Q8NF91 8797 aaKnown RBP-0.31□□□□□ -2.46
SSB-208ENST00000468600 ZNF532Q9HCE3 1301 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 ZNF705FA8MVS1 300 aaPredicted RBP-0.31□□□□□ -2.46
SSB-208ENST00000468600 TCF21O43680 179 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 CEACAM21Q3KPI0 293 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 TMEM53Q6P2H8 277 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 NELFCDQ8IXH7 590 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 GTF2H4Q92759 462 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 Q96M85 177 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 PLIN2Q99541 437 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 DDIT4Q9NX09 232 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 KLK5Q9Y337 293 aaPredicted RBP-0.31□□□□□ -2.46
SSB-208ENST00000468600 ATAD2BQ9ULI0 1458 aa-0.31□□□□□ -2.46
SSB-208ENST00000468600 SPOPO43791 374 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 SOD1P00441 154 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 OR4A8P0C604 315 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 ZNF90Q03938 601 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 PSG3Q16557 428 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 FAM27D1Q5T7N8 215 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 OR8D1Q8WZ84 308 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 BCL2L14Q9BZR8 327 aa-0.32□□□□□ -2.46
SSB-208ENST00000468600 DMBT1Q9UGM3 2413 aaPredicted RBP-0.32□□□□□ -2.46
SSB-208ENST00000468600 RNASEK-C17orf49H0YIS7 233 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 TEX46H3BTG2 121 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 M0R1B8 84 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 PRMT5O14744 637 aaPredicted RBP-0.33□□□□□ -2.46
SSB-208ENST00000468600 HSBP1O75506 76 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 ATF1P18846 271 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 CEACAM16Q2WEN9 425 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 MAJINQ3KP22 176 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 SPATA8Q6RVD6 105 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 EIF3MQ7L2H7 374 aaKnown RBP-0.33□□□□□ -2.46
SSB-208ENST00000468600 SSX7Q7RTT5 188 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 CYP4Z1Q86W10 505 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 CA5BP1Q8WTZ4 195 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 ISOC2Q96AB3 205 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 FAM131CQ96AQ9 280 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 UPK3BQ9BT76 320 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 POMKQ9H5K3 350 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 C16orf95Q9H693 158 aa-0.33□□□□□ -2.46
SSB-208ENST00000468600 WDR55Q9H6Y2 383 aaPredicted RBP-0.33□□□□□ -2.46
SSB-208ENST00000468600 IGKV1-12A0A0C4DH73 117 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 A0A1B0GXF2 115 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 DHRS12A0PJE2 317 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 PGPA6NDG6 321 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 IGKV1D-12P01611 117 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 P2RY2P41231 377 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 TSPAN31Q12999 210 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 FREM1Q5H8C1 2179 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 NXNL2Q5VZ03 156 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 BZW1Q7L1Q6 419 aaKnown RBP-0.34□□□□□ -2.46
SSB-208ENST00000468600 SLC35F6Q8N357 371 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 FMC1Q96HJ9 113 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 SLC38A1Q9H2H9 487 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 ARMC7Q9H6L4 198 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 LYRM4Q9HD34 91 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 ANXA10Q9UJ72 324 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 STK38LQ9Y2H1 464 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 SLX4Q8IY92 1834 aa-0.34□□□□□ -2.46
SSB-208ENST00000468600 NUMA1Q14980 2115 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 ARGFXA6NJG6 315 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 H3BPC8 53 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 TRAPPC6AO75865 159 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 MYO1DO94832 1006 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 KLK1P06870 262 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 M6PRP20645 277 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 CD82P27701 267 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 GTF2H1P32780 548 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 IDH3GP51553 393 aaPredicted RBP-0.35□□□□□ -2.47
SSB-208ENST00000468600 TRAM1L1Q8N609 369 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 TRIML2Q8N7C3 387 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 LFNGQ8NES3 379 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 SPPL2BQ8TCT7 592 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 PDCD6IPQ8WUM4 868 aaKnown RBP-0.35□□□□□ -2.47
SSB-208ENST00000468600 LINC01587Q99440 93 aa-0.35□□□□□ -2.47
SSB-208ENST00000468600 TRAV8-3A0A0A6YYJ7 113 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 IGHV2-26A0A0B4J1V2 119 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 LRRIQ4A6NIV6 560 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 TMEM250H0YL14 139 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 H7C2Y5 167 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 M0QXV9 152 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 TOR1AO14656 332 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 SIVA1O15304 175 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 ALOX12BO75342 701 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 IGHV3-30-3P0DP02 117 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 GPX2P18283 190 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 ERHP84090 104 aaKnown RBP-0.36□□□□□ -2.47
SSB-208ENST00000468600 ASCC1Q8N9N2 400 aaKnown RBP-0.36□□□□□ -2.47
SSB-208ENST00000468600 OR8B12Q8NGG6 310 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms