RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ISPDA4D126 451 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 MEIS3P1A6NDR6 274 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 RFPL4AA6NLU0 287 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM14DPA8MWL7 114 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CLDN25C9JDP6 229 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PPIAL4DF5H284 164 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 RFPL4AL1F8VTS6 287 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 SH2D1BO14796 132 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 LDLRAD4O15165 306 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PPIHO43447 177 aaKnown RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 SSX4O60224 188 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 OR7C1O76099 320 aaPredicted RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 APOA1P02647 267 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 GYPAP02724 150 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CD55P08174 381 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PGA5P0DJD9 388 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PPIAL4FP0DN26 164 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 DAOP14920 347 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PRDX2P32119 198 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 MNDAP41218 407 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 INPP1P49441 399 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PPOXP50336 477 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 TAS2R20P59543 309 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 KRTAP10-9P60411 292 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 FGF12P61328 243 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 RPS27AP62979 156 aaKnown RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 QRFPP83859 136 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PITPNAQ00169 270 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 DYNC1I2Q13409 638 aaKnown RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ARFRP1Q13795 201 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF846Q147U1 533 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 SRSF7Q16629 238 aaKnown RBP eCLIP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM76BQ5HYJ3 339 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM69Q5SWH9 247 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 MORN5Q5VZ52 161 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 OLFML2AQ68BL7 652 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 C11orf71Q6IPW1 123 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 FIP1L1Q6UN15 594 aaKnown RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ASCL4Q6XD76 172 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ACP7Q6ZNF0 438 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 C6orf201Q7Z4U5 140 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 LRRC28Q86X40 367 aaPredicted RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF575Q86XF7 245 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 SAXO1Q8IYX7 474 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 GCSAMQ8N6F7 178 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 POC1AQ8NBT0 407 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 OR4M2Q8NGB6 313 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 OR56B1Q8NGI3 324 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 OR10R2Q8NGX6 335 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 OR10Z1Q8NGY1 313 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 S100ZQ8WXG8 99 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 RAB40AQ8WXH6 277 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 DYRK2Q92630 601 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 RDH5Q92781 318 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 YIPF5Q969M3 257 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ERGIC1Q969X5 290 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 SLC25A38Q96DW6 304 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 RAB3CQ96E17 227 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ARHGAP5-AS1Q96IT6 56 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CYYR1Q96J86 154 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 C1orf147Q96MC9 270 aaPredicted RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CMTM3Q96MX0 182 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CCL13Q99616 98 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 FAAP24Q9BTP7 215 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PECRQ9BY49 303 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ABCG5Q9H222 651 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CXorf56Q9H5V9 222 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 NARFLQ9H6Q4 476 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PLEKHF2Q9H8W4 249 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PLEKHA2Q9HB19 425 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CHMP1AQ9HD42 196 aaPredicted RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 HMG20AQ9NP66 347 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ABCB10Q9NRK6 738 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM106BQ9NUM4 274 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PLEKHJ1Q9NW61 149 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 NLKQ9UBE8 527 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 ELF5Q9UKW6 265 aaPredicted RBP3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PLEKHA6Q9Y2H5 1048 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 WIPI2Q9Y4P8 454 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 PPIAL4AQ9Y536 164 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 A3GALT2U3KPV4 340 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 CFAP46Q8IYW2 2715 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM208BQ5VWN6 2430 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 RELNP78509 3460 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 TRAV39A0A0B4J263 110 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 TRAV38-1A0A0B4J264 116 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A1B0GWJ7 208 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 MEX3AA1L020 520 aaKnown RBP3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 MEIOCA2RUB1 952 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM235A6NFC5 223 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 OOEPA6NGQ2 149 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 OR2AT4A6NND4 320 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 SRRM5B3KS81 715 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 MCRIP1C9JLW8 97 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM178BH3BS89 294 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 LGALS8O00214 317 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 ADAM20O43506 726 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 XRCC3O43542 346 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 GOSR1O95249 250 aa3.39□□□□□ -1.87
TMEM39A-204ENST00000468545 PTBP3O95758 552 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms