RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TAS2R46P59540 309 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 MRPS34P82930 218 aaKnown RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SRSF1Q07955 248 aaKnown RBP eCLIP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 GUK1Q16774 197 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 AWAT1Q58HT5 328 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 TMEM128Q5BJH2 165 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SPNS3Q6ZMD2 512 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ETV3LQ6ZN32 361 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 NKAIN3Q8N8D7 197 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 OR5AP2Q8NGF4 316 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 CCL17Q92583 94 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 FRZBQ92765 325 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SGK3Q96BR1 496 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 NTNG2Q96CW9 530 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SLAMF6Q96DU3 332 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 C2orf50Q96LR7 162 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 MAGT1Q9H0U3 335 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 BCO1Q9HAY6 547 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 LPAR2Q9HBW0 351 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 GPR35Q9HC97 309 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 UFSP2Q9NUQ7 469 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 TAAR3PQ9P1P4 343 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ACANP16112 2415 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 CYB5BO43169 146 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SPRY3O43610 288 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 IFNA10P01566 189 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ACAA2P42765 397 aaKnown RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 MTCP1P56278 107 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 EFNB1P98172 346 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 MESTQ5EB52 335 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 THEM4Q5T1C6 240 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 C1orf87Q8N0U7 546 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 AKR7LQ8NHP1 331 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 GPX8Q8TED1 209 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ZDHHC16Q969W1 377 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 PHYHIPLQ96FC7 376 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ARHGAP5-AS1Q96IT6 56 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 GPR84Q9NQS5 396 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 GDF2Q9UK05 429 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 FZR1Q9UM11 496 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 WNK2Q9Y3S1 2297 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 C7orf77A4D0Y5 90 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 RNF223E7ERA6 249 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 OR7C1O76099 320 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 YIF1AO95070 293 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 MSR1P21757 451 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 CDAP32320 146 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 PRSS12P56730 875 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 RPS11P62280 158 aaKnown RBP eCLIP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 RAB11AP62491 216 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 RPL23AP62750 156 aaKnown RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 PDCD1Q15116 288 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 HMGN3Q15651 99 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 FAHD2BQ6P2I3 314 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 BRICD5Q6PL45 260 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 IL34Q6ZMJ4 242 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 BIVMQ86UB2 503 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 GGNQ86UU5 652 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 NECAP1Q8NC96 275 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 C1orf162Q8NEQ5 155 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 NINJ1Q92982 152 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 RAB39BQ96DA2 213 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 FAHD2AQ96GK7 314 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 OR5B12Q96R08 314 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF251Q9BRH9 671 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 NIPSNAP3BQ9BS92 247 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 REG4Q9BYZ8 158 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 NMNAT2Q9BZQ4 307 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 RTN4RQ9BZR6 473 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 FBXL17Q9UF56 701 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 R4GMQ9 66 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ANKRD30BLA7E2S9 258 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 KLF4O43474 513 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 LMX1BO60663 402 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 UPK3AO75631 287 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 TNFSF13O75888 250 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 DUS4LO95620 317 aaKnown RBP5.16□□□□□ -1.58
SHQ1-205ENST00000468371 CHRM2P08172 466 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 RNF224P0DH78 156 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF728P0DKX0 622 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 IGHV1-2P23083 117 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 LAP3P28838 519 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 B3GALT5-AS1P59052 145 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 SRSF3P84103 164 aaKnown RBP5.16□□□□□ -1.58
SHQ1-205ENST00000468371 TAF9Q16594 264 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 FBXL19-AS1Q494R0 122 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 ATG4DQ86TL0 474 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-205ENST00000468371 ZSCAN4Q8NAM6 433 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-205ENST00000468371 BORCS8Q96FH0 119 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 ADAM19Q9H013 955 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 SLC17A5Q9NRA2 495 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 GAR1Q9NY12 217 aaKnown RBP5.16□□□□□ -1.58
SHQ1-205ENST00000468371 LPAR3Q9UBY5 353 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 GAB2Q9UQC2 676 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 SHANK1Q9Y566 2161 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 GPR37O15354 613 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 FABP4P15090 132 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 KIR3DL2P43630 455 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 PABPC1L2AQ5JQF8 200 aa5.16□□□□□ -1.58
SHQ1-205ENST00000468371 CLEC18BQ6UXF7 455 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms