RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TCEAL7Q9BRU2 100 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 RNF122Q9H9V4 155 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 PPP1R14DQ9NXH3 145 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 LOC390937A0A1W2PQ73 354 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF205O95201 554 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 CEACAM1P13688 526 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 GNB2P62879 340 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 TMEM45BQ96B21 275 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 OPN3Q9H1Y3 402 aaPredicted RBP11.96□□□□□ -0.49
BRAT1-203ENST00000467558 VSIG4Q9Y279 399 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.5
BRAT1-203ENST00000467558 OR5G3P0C626 314 aa11.96□□□□□ -0.5
BRAT1-203ENST00000467558 TMEM33P57088 247 aa11.96□□□□□ -0.5
BRAT1-203ENST00000467558 POLR2GP62487 172 aaKnown RBP eCLIP11.96□□□□□ -0.5
BRAT1-203ENST00000467558 UQCC3Q6UW78 93 aa11.96□□□□□ -0.5
BRAT1-203ENST00000467558 C9orf62Q8N4C0 152 aa11.96□□□□□ -0.5
BRAT1-203ENST00000467558 ADAD2Q8NCV1 583 aaKnown RBP11.96□□□□□ -0.5
BRAT1-203ENST00000467558 MYLKQ15746 1914 aa11.96□□□□□ -0.5
BRAT1-203ENST00000467558 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 AQP7O14520 342 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 P2RX3P56373 397 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 MRPS11P82912 194 aaKnown RBP11.95□□□□□ -0.5
BRAT1-203ENST00000467558 TIPARPQ7Z3E1 657 aaKnown RBP11.95□□□□□ -0.5
BRAT1-203ENST00000467558 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 RXFP4Q8TDU9 374 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 DYRK2Q92630 601 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 RPEQ96AT9 228 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 ZNF488Q96MN9 340 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 PRR13Q9NZ81 148 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 K7EQM0 130 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 KLF7O75840 302 aaPredicted RBP11.95□□□□□ -0.5
BRAT1-203ENST00000467558 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 FAM96BQ9Y3D0 163 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 COL4A6Q14031 1691 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 THADAQ6YHU6 1953 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 OR7C2O60412 319 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 SLC25A6P12236 298 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 TLE1Q04724 770 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 SLC38A11Q08AI6 406 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 OR4F5Q8NH21 305 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
BRAT1-203ENST00000467558 C9orf172C9J069 976 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 H7BYZ3 331 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 YIF1AO95070 293 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 PRRX1P54821 245 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 BPIFB3P59826 476 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 UBE2V2Q15819 145 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 AQP3Q92482 292 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 MRPL24Q96A35 216 aaKnown RBP11.95□□□□□ -0.5
BRAT1-203ENST00000467558 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 RTN4RQ9BZR6 473 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 FKBP11Q9NYL4 201 aa11.95□□□□□ -0.5
BRAT1-203ENST00000467558 NOTCH4Q99466 2003 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 IGKV1D-43A0A0B4J1Z2 117 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 SYNGR2O43760 224 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 FGF2P09038 288 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 ASCL1P50553 236 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 FAM3AP98173 230 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 KCNMB1Q16558 191 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
BRAT1-203ENST00000467558 SOX7Q9BT81 388 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 HSF4Q9ULV5 492 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 TRAV39A0A0B4J263 110 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 CCL21O00585 134 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 CDK2AP1O14519 115 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 CTSSP25774 331 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 SUCLG1P53597 346 aaKnown RBP11.94□□□□□ -0.5
BRAT1-203ENST00000467558 ENDOGQ14249 297 aaKnown RBP11.94□□□□□ -0.5
BRAT1-203ENST00000467558 ADAM5Q6NVV9 412 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 ONECUT1Q9UBC0 465 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 IGHV3-13P01766 116 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 IGHV3-7P01780 117 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 METTL15P1P0C7V9 234 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 P2RY1P47900 373 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 PJVKQ0ZLH3 352 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 IL24Q13007 206 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 RGP1Q92546 391 aaPredicted RBP11.94□□□□□ -0.5
BRAT1-203ENST00000467558 PKIBQ9C010 78 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 NPTNQ9Y639 398 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
BRAT1-203ENST00000467558 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 J3QW42 95 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 TMEM267Q0VDI3 215 aaPredicted RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 RPL7L1Q6DKI1 246 aaKnown RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 NEIL1Q96FI4 390 aaPredicted RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 SEMA5BQ9P283 1151 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 CELA3AP09093 270 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 MGST1P10620 155 aaKnown RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 TMPRSS3P57727 454 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 MIDNQ504T8 468 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 SEZ6L2Q6UXD5 910 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 DOCK8Q8NF50 2099 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 RGS13O14921 159 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms