RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZNF396Q96N95 335 aaPredicted RBP1.15□□□□□ -2.23
SMC4-207ENST00000467263 APOL4Q9BPW4 351 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 ANKHQ9HCJ1 492 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 DDX18Q9NVP1 670 aaKnown RBP1.15□□□□□ -2.23
SMC4-207ENST00000467263 LAMB2P55268 1798 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 FLG2Q5D862 2391 aaPredicted RBP1.14□□□□□ -2.23
SMC4-207ENST00000467263 A0A0J9YX75 114 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 IGSF23A1L1A6 192 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 PRMT5O14744 637 aaPredicted RBP1.14□□□□□ -2.23
SMC4-207ENST00000467263 TRAPPC3O43617 180 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 TCF21O43680 179 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 GZMBP10144 247 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 GABRA4P48169 554 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 GCLMP48507 274 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 ZIC4Q8N9L1 334 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 CASTOR1Q8WTX7 329 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 PDCD6IPQ8WUM4 868 aaKnown RBP1.14□□□□□ -2.23
SMC4-207ENST00000467263 NELFBQ8WX92 580 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 MAP1LC3CQ9BXW4 147 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 RPRD1BQ9NQG5 326 aaKnown RBP1.14□□□□□ -2.23
SMC4-207ENST00000467263 FAM206AQ9NX38 181 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 POMPQ9Y244 141 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 AMMECR1Q9Y4X0 333 aaPredicted RBP1.14□□□□□ -2.23
SMC4-207ENST00000467263 SLIT2O94813 1529 aa1.14□□□□□ -2.23
SMC4-207ENST00000467263 COL4A1P02462 1669 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 GOLGA6L7A0A1B0GV03 622 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 IGKV2-29A2NJV5 120 aaPredicted RBP1.13□□□□□ -2.23
SMC4-207ENST00000467263 HMMRO75330 724 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 ZNF3P17036 446 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 ZNF7P17097 686 aaPredicted RBP1.13□□□□□ -2.23
SMC4-207ENST00000467263 PRKACAP17612 351 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 RAB38P57729 211 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 TSPAN31Q12999 210 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 FAM19A1Q7Z5A9 133 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 TCAIMQ8N3R3 496 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 CAPZA3Q96KX2 299 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 ALX4Q9H161 411 aaPredicted RBP1.13□□□□□ -2.23
SMC4-207ENST00000467263 COL18A1P39060 1754 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 NCKAP5O14513 1909 aa1.13□□□□□ -2.23
SMC4-207ENST00000467263 A8MWP6 167 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 RFXANKO14593 260 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 CA2P00918 260 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 TPM2P07951 284 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 SLC2A1P11166 492 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 WDR43Q15061 677 aaKnown RBP eCLIP1.12□□□□□ -2.23
SMC4-207ENST00000467263 OR8G1Q15617 311 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 HSP90AA4PQ58FG1 418 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 CLEC20AQ6ZU45 233 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 SSX7Q7RTT5 188 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 OR6N2Q8NGY6 317 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 SPPL2BQ8TCT7 592 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 BIRC8Q96P09 236 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 OR52B2Q96RD2 323 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 SLC19A3Q9BZV2 496 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 GAL3ST2Q9H3Q3 398 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 VAPAQ9P0L0 249 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 PSORS1C2Q9UIG4 136 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 CHTOPQ9Y3Y2 248 aaKnown RBP1.12□□□□□ -2.23
SMC4-207ENST00000467263 MINOS1-NBL1R4GNA1 71 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 ARHGAP32A7KAX9 2087 aa1.12□□□□□ -2.23
SMC4-207ENST00000467263 MDC1Q14676 2089 aaKnown RBP1.12□□□□□ -2.23
SMC4-207ENST00000467263 KDELR3O43731 214 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 PDCD6O75340 191 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 MAGEA3P43357 314 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 TTPAP49638 278 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 RHOAP61586 193 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 ACTL10Q5JWF8 245 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 DCANP1Q8TF63 244 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 SUCNR1Q9BXA5 334 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 POTEKPQ9BYX7 375 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 BCL2L14Q9BZR8 327 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 TBL2Q9Y4P3 447 aaKnown RBP1.11□□□□□ -2.23
SMC4-207ENST00000467263 OR51B4Q9Y5P0 310 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 CRB1P82279 1406 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 PTPRKQ15262 1439 aa1.11□□□□□ -2.23
SMC4-207ENST00000467263 SDK1Q7Z5N4 2213 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 VPS37CA5D8V6 355 aaPredicted RBP1.1□□□□□ -2.23
SMC4-207ENST00000467263 F8VP50 259 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 PLPP3O14495 311 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 CRYGDP07320 174 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 CPN2P22792 545 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 CBX5P45973 191 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 ATP5J2P56134 94 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 OR2B6P58173 313 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 HBG1P69891 147 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 HBG2P69892 147 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 HTR4Q13639 388 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 FAM229BQ4G0N7 80 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 C6orf183Q5T699 404 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 OLIG3Q7RTU3 272 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 FAM19A3Q7Z5A8 133 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 FAM58AQ8N1B3 248 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 SLC25A45Q8N413 288 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 OR8G5Q8NG78 346 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 CACNG8Q8WXS5 425 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 CDKL2Q92772 493 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 CLDN23Q96B33 292 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 ZMYND19Q96E35 227 aaPredicted RBP1.1□□□□□ -2.23
SMC4-207ENST00000467263 COPS4Q9BT78 406 aa1.1□□□□□ -2.23
SMC4-207ENST00000467263 TDRD3Q9H7E2 651 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms