RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 NPIPB11E5RHQ5 1161 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 TMEM11P17152 192 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 SOX2P48431 317 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 MTNR1BP49286 362 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 GALEQ14376 348 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 HES1Q14469 280 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 ELP2Q6IA86 826 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 CCDC144NLQ6NUI1 221 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 ZNF529Q6P280 563 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 TNFAIP8L1Q8WVP5 186 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 TSEN15Q8WW01 171 aaKnown RBP16.24■□□□□ 0.19
COL6A1-203ENST00000466285 TRUB1Q8WWH5 349 aaKnown RBP16.24■□□□□ 0.19
COL6A1-203ENST00000466285 LINC00574Q9H8X3 128 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 ERVK13-1Q9NX77 482 aa16.24■□□□□ 0.19
COL6A1-203ENST00000466285 CDRT1O95170 752 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 FAM106CPP0CH98 169 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 DEFB136Q30KP8 78 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 KLHL30-AS1Q8NEE0 82 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 APH1BQ8WW43 257 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 P2RX4Q99571 388 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 FAM192AQ9GZU8 254 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 RHOFQ9HBH0 211 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 DHDHQ9UQ10 334 aa16.23■□□□□ 0.19
COL6A1-203ENST00000466285 M0QZK8 103 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 ALDH3A2P51648 485 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 MADCAM1Q13477 382 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 MEDAGQ5VYS4 303 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 SATL1Q86VE3 508 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 THNSL2Q86YJ6 484 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 SERPINA12Q8IW75 414 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 SYS1Q8N2H4 156 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 CBR4Q8N4T8 237 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 OR52I1Q8NGK6 324 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 CREB3L1Q96BA8 519 aa16.22■□□□□ 0.19
COL6A1-203ENST00000466285 AMMECR1Q9Y4X0 333 aaPredicted RBP16.22■□□□□ 0.19
COL6A1-203ENST00000466285 A0A1W2PP11 408 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 MAGEA13PA6NCF6 341 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 SERPINE3A8MV23 424 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 H3BUI4 141 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 HSD17B6O14756 317 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 IL13RA2Q14627 380 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 Q8N6K4 173 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 SUMF2Q8NBJ7 301 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 PXT1Q8NFP0 134 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 OR13C5Q8NGS8 318 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 OR5AK2Q8NH90 309 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 RAX2Q96IS3 184 aa16.21■□□□□ 0.19
COL6A1-203ENST00000466285 SIRT4Q9Y6E7 314 aaPredicted RBP16.21■□□□□ 0.19
COL6A1-203ENST00000466285 IGHV3-43A0A0B4J1X8 118 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 TMEM212A6NML5 194 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 NUDT19A8MXV4 375 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 ZNF736B4DX44 427 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-203ENST00000466285 SLC31A2O15432 143 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 HTR3BO95264 441 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 DUS4LO95620 317 aaKnown RBP16.2■□□□□ 0.18
COL6A1-203ENST00000466285 CLIC3O95833 236 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 LIMS3P0CW19 117 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 LIMS4P0CW20 117 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 IGHV3-43DP0DP04 118 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 LUMP51884 338 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-203ENST00000466285 SMN1Q16637 294 aaKnown RBP16.2■□□□□ 0.18
COL6A1-203ENST00000466285 SLC35E3Q7Z769 313 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 STPG2Q8N412 459 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 Q8NFD4 153 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 OR5D14Q8NGL3 314 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 B9D2Q9BPU9 175 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 DPCDQ9BVM2 203 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-203ENST00000466285 JAM3Q9BX67 310 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 GMPPBQ9Y5P6 360 aa16.2■□□□□ 0.18
COL6A1-203ENST00000466285 IGHV1-3A0A0C4DH29 117 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 C15orf65H3BRN8 121 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 IGHG2P01859 326 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 RPLP1P05386 114 aaKnown RBP16.19■□□□□ 0.18
COL6A1-203ENST00000466285 RAB3AP20336 220 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 PAX5Q02548 391 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 CD69Q07108 199 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 ASCL4Q6XD76 172 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 EAF1Q96JC9 268 aaPredicted RBP16.19■□□□□ 0.18
COL6A1-203ENST00000466285 GPER1Q99527 375 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 SLC29A1Q99808 456 aa16.19■□□□□ 0.18
COL6A1-203ENST00000466285 DYNC2H1Q8NCM8 4307 aaKnown RBP16.18■□□□□ 0.18
COL6A1-203ENST00000466285 H0YHG0 523 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 GEMIN2O14893 280 aaKnown RBP16.18■□□□□ 0.18
COL6A1-203ENST00000466285 FGF16O43320 207 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 CIB2O75838 187 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 C21orf33P30042 268 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-203ENST00000466285 RAB7AP51149 207 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 RBM11P57052 281 aaKnown RBP16.18■□□□□ 0.18
COL6A1-203ENST00000466285 ZNF816Q0VGE8 651 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-203ENST00000466285 RSU1Q15404 277 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 OR8H3Q8N146 312 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 Q8N9W7 124 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 TMEM104Q8NE00 496 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 OR10X1Q8NGY0 326 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 RHOXF1Q8NHV9 184 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 CHPT1Q8WUD6 406 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 CCDC107Q8WV48 283 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 HSPB9Q9BQS6 159 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 NCOR1P1Q9H4R4 102 aa16.18■□□□□ 0.18
COL6A1-203ENST00000466285 PCDHB16Q9NRJ7 776 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms