RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PRPS1L1P21108 318 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 RPA3P35244 121 aaPredicted RBP1.55□□□□□ -2.16
SMC4-205ENST00000465563 ZNF83P51522 516 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 STX3Q13277 289 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 TPBGQ13641 420 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 MMDQ15546 238 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 TRIP13Q15645 432 aaPredicted RBP1.55□□□□□ -2.16
SMC4-205ENST00000465563 GOLGA7BQ2TAP0 167 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 BSXQ3C1V8 233 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 AHSA2Q719I0 299 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 MRPL52Q86TS9 123 aaKnown RBP1.55□□□□□ -2.16
SMC4-205ENST00000465563 SPERTQ8NA61 448 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 GATD1Q8NB37 220 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 TWIST2Q8WVJ9 160 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 RORBQ92753 470 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 TRIB3Q96RU7 358 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 PRSS27Q9BQR3 290 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 ANAPC13Q9BS18 74 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 TSSK6Q9BXA6 273 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 GABARAPL1Q9H0R8 117 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 OR5V1Q9UGF6 321 aa1.55□□□□□ -2.16
SMC4-205ENST00000465563 TBL2Q9Y4P3 447 aaKnown RBP1.55□□□□□ -2.16
SMC4-205ENST00000465563 MPDZO75970 2070 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 UBDO15205 165 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 POLR3GO15318 223 aaPredicted RBP1.54□□□□□ -2.16
SMC4-205ENST00000465563 SLC31A1O15431 190 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 GP1BAP07359 652 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 SLC35E2BP0CK96 405 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 UBE2KP61086 200 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 ZCWPW2Q504Y3 356 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 PYDC2Q56P42 97 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 LAIR2Q6ISS4 152 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 FAM19A3Q7Z5A8 133 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 ZNF738Q8NE65 137 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 CMTM2Q8TAZ6 248 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 FAM45AQ8TCE6 357 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 CMBLQ96DG6 245 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 REEP6Q96HR9 211 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 HBEGFQ99075 208 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 CHD2O14647 1828 aaKnown RBP1.54□□□□□ -2.16
SMC4-205ENST00000465563 ARHGAP32A7KAX9 2087 aa1.54□□□□□ -2.16
SMC4-205ENST00000465563 A0A1B0GTI1 187 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 OR5H14A6NHG9 310 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 LDOC1O95751 146 aaPredicted RBP1.53□□□□□ -2.16
SMC4-205ENST00000465563 OPN1SWP03999 348 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 MLNP12872 115 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 EVI2BP34910 448 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 OR2B6P58173 313 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 RHOAP61586 193 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 HES3Q5TGS1 186 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 NXNL2Q5VZ03 156 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 DGAT2L6Q6ZPD8 337 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 TCF24Q7RTU0 167 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 LYZL2Q7Z4W2 148 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 KRTCAP2Q8N6L1 136 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 Q8NDZ9 215 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 RAD51AP1Q96B01 352 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 SLC25A44Q96H78 314 aaPredicted RBP1.53□□□□□ -2.16
SMC4-205ENST00000465563 SERPINB11Q96P15 392 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 EBPLQ9BY08 206 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 ULBP1Q9BZM6 244 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 USP42Q9H9J4 1324 aaKnown RBP1.53□□□□□ -2.16
SMC4-205ENST00000465563 TAS2R13Q9NYV9 303 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 LINC00588Q9Y4M8 146 aa1.53□□□□□ -2.16
SMC4-205ENST00000465563 TRPM3Q9HCF6 1732 aaPredicted RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 CEP170Q5SW79 1584 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 KIAA0232Q92628 1395 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 RAB3GAP2Q9H2M9 1393 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 GOLGA8QA0A0J9YX86 632 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 I3L4J1 428 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 K7ERQ8 282 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 LECT2O14960 151 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 YKT6O15498 198 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 FABP7O15540 132 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 CRXO43186 299 aaPredicted RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 MAGEA6P43360 314 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 BCL2A1Q16548 175 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 LGALSLQ3ZCW2 172 aaPredicted RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 OR10J3Q5JRS4 329 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 CASTOR1Q8WTX7 329 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 PDCD6IPQ8WUM4 868 aaKnown RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 KCTD4Q8WVF5 259 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 CCDC124Q96CT7 223 aaKnown RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 PGLYRP3Q96LB9 341 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 CATSPER2Q96P56 530 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 ALX4Q9H161 411 aaPredicted RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 OR52A5Q9H2C5 316 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 MCTS1Q9ULC4 181 aaKnown RBP1.52□□□□□ -2.17
SMC4-205ENST00000465563 BTRCQ9Y297 605 aa1.52□□□□□ -2.17
SMC4-205ENST00000465563 DNMT1P26358 1616 aaKnown RBP1.51□□□□□ -2.17
SMC4-205ENST00000465563 ABCB11O95342 1321 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 TRBV24-1A0A075B6N3 115 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 IGHV3OR15-7A0A075B7D8 119 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 TRAV8-2A0A0B4J237 113 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 A0A1W2PRG6 482 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 E7EQL1 145 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 FGF16O43320 207 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 PSCAO43653 123 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 SYNGR2O43760 224 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms