RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 KCNJ16Q9NPI9 418 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 PHPT1Q9NRX4 125 aaPredicted RBP2.71□□□□□ -1.98
SNX4-202ENST00000465505 TMEM30AQ9NV96 361 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 UQCC1Q9NVA1 299 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 FBXL12Q9NXK8 326 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 DOK5Q9P104 306 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 GAGE2DQ9UEU5 116 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 MMP17Q9ULZ9 603 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 TNFSF18Q9UNG2 199 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 LAMTOR2Q9Y2Q5 125 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 TMED3Q9Y3Q3 217 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 WIPI2Q9Y4P8 454 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 SPIN1Q9Y657 262 aaPredicted RBP2.71□□□□□ -1.98
SNX4-202ENST00000465505 VWA8A3KMH1 1905 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 MAPKBP1O60336 1514 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 ARHGEF12Q9NZN5 1544 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 SCN1AP35498 2009 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 PIK3C2BO00750 1634 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 CLTCL1P53675 1640 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 BIVM-ERCC5R4GMW8 1640 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 ERVK-7P63135 1459 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 ITSN1Q15811 1721 aa2.71□□□□□ -1.98
SNX4-202ENST00000465505 ADAMTSL3P82987 1691 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 BLMP54132 1417 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 PPLO60437 1756 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ARAP3Q8WWN8 1544 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TRAV18A0A075B6X5 111 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 A0A0G2JN53 185 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 PNMA8CA0A1B0GUJ8 204 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TSPAN11A1L157 253 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 FAM166BA8MTA8 275 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 FOXI3A8MTJ6 420 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 ZNF724A8MTY0 619 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 K7ENP7 123 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ZNF593O00488 134 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 GAPDHSO14556 408 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 MPDU1O75352 247 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TOXO94900 526 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 C1orf105O95561 183 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 IGHG2P01859 326 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 APOA2P02652 100 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 SERPINE1P05121 402 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 CD2P06729 351 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 PFN1P07737 140 aaKnown RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 NMBP08949 121 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ZSCAN5DPP0CG00 497 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 FAM157CP0CG43 387 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 MGMTP16455 207 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ORM2P19652 201 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 MYL9P24844 172 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ATP6V0CP27449 155 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 CD34P28906 385 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 HRH1P35367 487 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 CXCL12P48061 93 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 GNG4P50150 75 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 PDX1P52945 283 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 NCS1P62166 190 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 EIF5AP63241 154 aaKnown RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 ZNF763Q0D2J5 394 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 UNC119Q13432 240 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 GNMTQ14749 295 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 MEF2DQ14814 521 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ATXN7L3Q14CW9 347 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 GUSBP1Q15486 140 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 SSX1Q16384 188 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 SLC25A35Q3KQZ1 300 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TMEM215Q68D42 235 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 HIST2H2BDQ6DRA6 164 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 DMKNQ6E0U4 476 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 CDC42EP5Q6NZY7 148 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TNFAIP8L2Q6P589 184 aaPredicted RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 TRIM40Q6P9F5 258 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 SLC25A47Q6Q0C1 308 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ADAMTSL5Q6ZMM2 481 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 PQLC2Q6ZP29 291 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 FOXI2Q6ZQN5 318 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 RASSF6Q6ZTQ3 369 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TMUB2Q71RG4 321 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TSEN54Q7Z6J9 526 aaKnown RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 HAPLN4Q86UW8 402 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 MUC15Q8N387 334 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TCTEX1D1Q8N7M0 179 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 RNF149Q8NC42 400 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 ZNF740Q8NDX6 193 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 BPIFB6Q8NFQ5 453 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 OR1J2Q8NGS2 313 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 OR2T4Q8NH00 348 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 OR5W2Q8NH69 310 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 UPRTQ96BW1 309 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 CCDC126Q96EE4 140 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 NEDD4LQ96PU5 975 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 TSPAN32Q96QS1 320 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 PSMB7Q99436 277 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 GPER1Q99527 375 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 LITAFQ99732 161 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 MRPL57Q9BQC6 102 aaKnown RBP2.7□□□□□ -1.98
SNX4-202ENST00000465505 AGMATQ9BSE5 352 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 FAIM2Q9BWQ8 316 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 OR2J1Q9GZK6 312 aa2.7□□□□□ -1.98
SNX4-202ENST00000465505 OR8D2Q9GZM6 311 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms