RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 A8MZ25 164 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 H0YJX3 145 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 DHRS3O75911 302 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 BRI3O95415 125 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 GNAO1P09471 354 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 VDAC1P21796 283 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 SLC2A5P22732 501 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 GNG10P50151 68 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 AADACL4Q5VUY2 407 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 ZNF691Q5VV52 312 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 NXNL2Q5VZ03 156 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 TGIF2LXQ8IUE1 241 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 OR4D6Q8NGJ1 314 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 IL17DQ8TAD2 202 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 APOL4Q9BPW4 351 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 GON7Q9BXV9 100 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 GTF2A1LQ9UNN4 478 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
HDAC6-214ENST00000465269 A0A087X0M5 115 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 A0A1B0GX30 115 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 G3V318 75 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 J3QR06 171 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 PRODHO43272 600 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 ENTPD6O75354 484 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 TTRP02766 147 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 SNRPBP14678 240 aaKnown RBP11.5□□□□□ -0.57
HDAC6-214ENST00000465269 ATP6V1B1P15313 513 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 BCL3P20749 454 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 ERP29P30040 261 aaKnown RBP11.5□□□□□ -0.57
HDAC6-214ENST00000465269 PTGFRP43088 359 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 SNRPGP62308 76 aaKnown RBP11.5□□□□□ -0.57
HDAC6-214ENST00000465269 MOB3BQ86TA1 216 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 Q8N6K4 173 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 RHOXF1Q8NHV9 184 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 CASTOR1Q8WTX7 329 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 CORO2AQ92828 525 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 COQ2Q96H96 371 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 KIRREL1Q96J84 757 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 PLSCR3Q9NRY6 295 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
HDAC6-214ENST00000465269 CLN6Q9NWW5 311 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 TAS2R3Q9NYW6 316 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 VSIG4Q9Y279 399 aa11.5□□□□□ -0.57
HDAC6-214ENST00000465269 IGHV4OR15-8A0A075B7B6 117 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 A0A087WW49 117 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 ODAMA1E959 279 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 ZNF736B4DX44 427 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-214ENST00000465269 C12orf77C9JDV5 145 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 MPZL2O60487 215 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 MRPL3P09001 348 aaKnown RBP11.49□□□□□ -0.57
HDAC6-214ENST00000465269 PRKACAP17612 351 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 GABRB1P18505 474 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 ISL1P61371 349 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 RUNX1Q01196 453 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 MADCAM1Q13477 382 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 SLC35D3Q5M8T2 416 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 PLEKHG7Q6ZR37 379 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 LYPD6Q86Y78 171 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 ZNF454Q8N9F8 522 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 OR14K1Q8NGZ2 314 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 CNIH3Q8TBE1 160 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 TMED9Q9BVK6 235 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
HDAC6-214ENST00000465269 HIPK2Q9H2X6 1198 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 PCDHB16Q9NRJ7 776 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 PSG11Q9UQ72 335 aa11.49□□□□□ -0.57
HDAC6-214ENST00000465269 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 A0A1B0GTI1 187 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 MAGEB4O15481 346 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-214ENST00000465269 APOL3O95236 402 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 ALOX5APP20292 161 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 UBE2V2Q15819 145 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 SLC25A30Q5SVS4 291 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 LCN1P1Q5VSP4 162 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 MEDAGQ5VYS4 303 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 RNLSQ5VYX0 342 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 GID4Q8IVV7 300 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 C8orf59Q8N0T1 100 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-214ENST00000465269 SETD9Q8NE22 299 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 APH1BQ8WW43 257 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 AMBNQ9NP70 447 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 AMMECR1Q9Y4X0 333 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-214ENST00000465269 V9GYS6 101 aa11.48□□□□□ -0.57
HDAC6-214ENST00000465269 WBP4O75554 376 aaKnown RBP11.47□□□□□ -0.57
HDAC6-214ENST00000465269 OR2H2O95918 312 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 HTR1FP30939 366 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 HSPA13P48723 471 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 F2RL1P55085 397 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 ZP1P60852 638 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 SCN1BQ07699 218 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 ATXN7L3Q14CW9 347 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-214ENST00000465269 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms