RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TINAGQ9UJW2 476 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 SPG11Q96JI7 2443 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 HEATR1Q9H583 2144 aaKnown RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 FCGR3BO75015 233 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 PGA4P0DJD7 388 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 PGA3P0DJD8 388 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 MMP9P14780 707 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 TMEM11P17152 192 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 DHODHQ02127 395 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 SLC38A11Q08AI6 406 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 MYPOPQ86VE0 399 aaPredicted RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 AQP3Q92482 292 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 FAM210BQ96KR6 192 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 OR2D2Q9H210 308 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 A0A1W2PNV4 684 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 SPRY3O43610 288 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 FCGR3AP08637 254 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 SNRPCP09234 159 aaKnown RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 SCTP09683 121 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 PPP1CCP36873 323 aaKnown RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 IL13RA2Q14627 380 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 USF3Q68DE3 2245 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 SKA3Q8IX90 412 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 COMMD1Q8N668 190 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 DEFB123Q8N688 67 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 STARD10Q9Y365 291 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 TRGV5A0A0B4J1U4 118 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 TCAPO15273 167 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 FGF2P09038 288 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 RAB5AP20339 215 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 VDAC1P21796 283 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 MST1P26927 711 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 PSG4Q00888 419 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 ENDOGQ14249 297 aaKnown RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 FFAR4Q5NUL3 377 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 WDR74Q6RFH5 385 aaPredicted RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 RBMXL3Q8N7X1 1067 aaKnown RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 OR2Z1Q8NG97 314 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 MSI2Q96DH6 328 aaKnown RBP7.91□□□□□ -1.14
HPS4-208ENST00000464362 RSG1Q9BU20 258 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 TCFL5Q9UL49 500 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 KCNMB2Q9Y691 235 aa7.91□□□□□ -1.14
HPS4-208ENST00000464362 CLDN34H7C241 214 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 J3QRE1 110 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 M0R1B8 84 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 TOX4O94842 621 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 ACTL6AO96019 429 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 MBPP02686 304 aaPredicted RBP7.9□□□□□ -1.14
HPS4-208ENST00000464362 LIFP15018 202 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 NOVA1P51513 510 aaKnown RBP7.9□□□□□ -1.14
HPS4-208ENST00000464362 FAM173AQ9BQD7 235 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 OR2H1Q9GZK4 316 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 SH3BGRL3Q9H299 93 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 ZNF391Q9UJN7 358 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 H3BQ15 152 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 CRYAAP02489 173 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 OR5G3P0C626 314 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 DLK1P80370 383 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 FLVCR1-AS1Q8TAF5 88 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 POC1BQ8TC44 478 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 ZNF837Q96EG3 531 aaPredicted RBP7.9□□□□□ -1.14
HPS4-208ENST00000464362 RYDENQ9NUL5 291 aaKnown RBP7.9□□□□□ -1.14
HPS4-208ENST00000464362 TMEM38BQ9NVV0 291 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 DOCK11Q5JSL3 2073 aa7.9□□□□□ -1.14
HPS4-208ENST00000464362 TRAV14DV4A0A0A6YYC5 116 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 A0A1W2PQM1 296 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 SYNGR2O43760 224 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 RAB4AP20338 218 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 NPBWR2P48146 333 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 GNG10P50151 68 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 SURF2Q15527 256 aaPredicted RBP7.9□□□□□ -1.15
HPS4-208ENST00000464362 TEX30Q5JUR7 227 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 VAX1Q5SQQ9 334 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 CYB561D1Q8N8Q1 229 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 OR52M1Q8NGK5 317 aa7.9□□□□□ -1.15
HPS4-208ENST00000464362 G3V3Q6 166 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 PSG2P11465 335 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 STPG1Q5TH74 334 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 DHRS11Q6UWP2 260 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 TIPARPQ7Z3E1 657 aaKnown RBP7.89□□□□□ -1.15
HPS4-208ENST00000464362 DAZAP1Q96EP5 407 aaKnown RBP7.89□□□□□ -1.15
HPS4-208ENST00000464362 AP1S3Q96PC3 154 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 TXN2Q99757 166 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 GPR35Q9HC97 309 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 TAAR3PQ9P1P4 343 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 POMT1Q9Y6A1 747 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 PLXND1Q9Y4D7 1925 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 TSC2P49815 1807 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 RNF222A6NCQ9 220 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 AP4M1O00189 453 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 ZNF737O75373 536 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 FBP1P09467 338 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 SMIM6P0DI80 62 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 ZNF17P17021 662 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 MEOX1P50221 254 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 TMEM50BP56557 158 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 HLA-DRB3P79483 266 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 DEFB109BQ30KR1 87 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 ZNF718Q3SXZ3 478 aa7.89□□□□□ -1.15
HPS4-208ENST00000464362 LINC00114Q6XXX2 140 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms