RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PHLDA2Q53GA4 152 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 SP5Q6BEB4 398 aaPredicted RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 MEX3BQ6ZN04 569 aaKnown RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 C6orf201Q7Z4U5 140 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 LINC00596Q86U02 117 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM170AQ8WVE7 144 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 FRZBQ92765 325 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 GMPPAQ96IJ6 420 aaPredicted RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 RHOVQ96L33 236 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 SPACA5Q96QH8 159 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 TXNDC17Q9BRA2 123 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 VN1R1Q9GZP7 353 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 MAGT1Q9H0U3 335 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 DUSP15Q9H1R2 295 aaPredicted RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 C11orf1Q9H5F2 150 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 CRLF2Q9HC73 371 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 PNRC2Q9NPJ4 139 aaKnown RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 KLRF1Q9NZS2 232 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 GNG13Q9P2W3 67 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 MYOTQ9UBF9 498 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 PRSS50Q9UI38 385 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 MCTS1Q9ULC4 181 aaKnown RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 ARHGEF17Q96PE2 2063 aaPredicted RBP6.22□□□□□ -1.41
CLSTN1-204ENST00000464286 ADAMTS9Q9P2N4 1935 aa6.21□□□□□ -1.41
CLSTN1-204ENST00000464286 TRAV9-1A0A075B6T8 112 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 A0A1B0GX78 115 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 LNP1A1A4G5 178 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 IGSF23A1L1A6 192 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 NKX2-6A6NCS4 301 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 RNF212BA8MTL3 300 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 FAM90A26D6RGX4 464 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 H0Y8X5 98 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 M0R135 149 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 TP53I11O14683 189 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 TRAF3IP2O43734 574 aaPredicted RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 C1QL1O75973 258 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 KBTBD11O94819 623 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 IGLV3-19P01714 112 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 GZMBP10144 247 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF17P17021 662 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 NDUFB7P17568 137 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 KLK2P20151 261 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 GNRHRP30968 328 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 OTX1P32242 354 aaPredicted RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 PCBD1P61457 104 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 PPP1CAP62136 330 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 SMAD4Q13485 552 aaKnown RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 ENDOGQ14249 297 aaKnown RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 BSXQ3C1V8 233 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 SP6Q3SY56 376 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM41BQ5BJD5 291 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 OTPQ5XKR4 325 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 TIPARPQ7Z3E1 657 aaKnown RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 TGIF2LXQ8IUE1 241 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 PLXDC1Q8IUK5 500 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 MRPL41Q8IXM3 137 aaKnown RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 SAXO1Q8IYX7 474 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 SELENOHQ8IZQ5 122 aaKnown RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 METTL27Q8N6F8 245 aaPredicted RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF321PQ8N8H1 164 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 OR52M1Q8NGK5 317 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 OR4X1Q8NH49 305 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 ABHD5Q8WTS1 349 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 PATE1Q8WXA2 126 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 LSM10Q969L4 123 aaKnown RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF799Q96GE5 643 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 SNX22Q96L94 193 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 FAAP24Q9BTP7 215 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 OR51I2Q9H344 312 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 PRO1933Q9H354 126 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF442Q9H7R0 627 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 METTL7AQ9H8H3 244 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 GPR27Q9NS67 375 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 B3GAT1Q9P2W7 334 aa6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 C19orf25Q9UFG5 118 aaPredicted RBP6.21□□□□□ -1.42
CLSTN1-204ENST00000464286 C2orf16Q68DN1 1984 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 IGKV1D-43A0A0B4J1Z2 117 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 A0A1B0GV50 99 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 A0A1W2PP11 408 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 MAP1LC3B2A6NCE7 125 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF705GA8MUZ8 300 aaPredicted RBP6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 NPIPA2E9PIF3 369 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 NPIPA3F8WFD2 350 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 RER1O15258 196 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ZFAND5O76080 213 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 AMBPP02760 352 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 SERPINE2P07093 398 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 CST2P09228 141 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 PGA5P0DJD9 388 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 FAHP16930 419 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 GALR1P47211 349 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 TNFSF10P50591 281 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 HNRNPKP61978 463 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 PAFAH1B2P68402 229 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 CCL20P78556 96 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 MRPS34P82930 218 aaKnown RBP6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 MEF2BQ02080 365 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms