RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 GCH1P30793 250 aa18.46■□□□□ 0.55
PDLIM2-216ENST00000464275 RBMXP38159 391 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-216ENST00000464275 MBNL2Q5VZF2 373 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-216ENST00000464275 TOMM40LQ969M1 308 aa18.46■□□□□ 0.55
PDLIM2-216ENST00000464275 LRRC46Q96FV0 321 aa18.46■□□□□ 0.55
PDLIM2-216ENST00000464275 SHANK1Q9Y566 2161 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 TRAV24A0A0B4J272 114 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 KIR2DS1A0A191URI9 304 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 DEGS1O15121 323 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 TIMM8AO60220 97 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 SLC34A2O95436 690 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 KIR2DS4P43632 304 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 KIR2DS1Q14954 304 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 Q6P435 159 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 IL34Q6ZMJ4 242 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 Q8NA96 180 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 S100PBPQ96BU1 408 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 SAT2Q96F10 170 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 MS4A7Q9GZW8 240 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 CXXC4Q9H2H0 198 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 TINAGQ9UJW2 476 aa18.45■□□□□ 0.54
PDLIM2-216ENST00000464275 APC2O95996 2303 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 HSPB6O14558 160 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 PRRG2O14669 202 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 HS3ST1O14792 307 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 MLNRO43193 412 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 ADAP1O75689 374 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 CTRB1P17538 263 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 FXYD4P59646 89 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 HERV-K104P61576 105 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 ABCA11PQ4W5N1 156 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 CTRB2Q6GPI1 263 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 CISD2Q8N5K1 135 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 OR1S2Q8NGQ3 325 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 RRNAD1Q96FB5 475 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 NRIP2Q9BQI9 281 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 ASF1BQ9NVP2 202 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 TRDCB7Z8K6 153 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 CDIPTO14735 213 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 GRPP07492 148 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 ZNF44P15621 663 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 MRPL30Q8TCC3 161 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 RDH5Q92781 318 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 NKX6-2Q9C056 277 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 MMP26Q9NRE1 261 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 PRR13Q9NZ81 148 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 ASPMQ8IZT6 3477 aa18.44■□□□□ 0.54
PDLIM2-216ENST00000464275 TMEM218A2RU14 115 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 ATG12O94817 140 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 ZNF205O95201 554 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 AADACP22760 399 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 FABP6P51161 128 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 ZNF83P51522 516 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 PIGPP57054 158 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 IGSF11Q5DX21 431 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 SVBPQ8N300 66 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 MUCL1Q96DR8 90 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 KCNIP3Q9Y2W7 256 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 ATP23Q9Y6H3 246 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 PRRC2CQ9Y520 2896 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 ACACAQ13085 2346 aa18.43■□□□□ 0.54
PDLIM2-216ENST00000464275 NXPH2O95156 264 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 CTXN2P0C2S0 81 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 MDH2P40926 338 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 DEFA5Q01523 94 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 DOLPP1Q86YN1 238 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 AIFM2Q9BRQ8 373 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 RSRP1Q9BUV0 290 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 SLC5A7Q9GZV3 580 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 CHD3Q12873 2000 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 TOR1AO14656 332 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 ABCD4O14678 606 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 DIRAS3O95661 229 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 PPYP01298 95 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 IFNA21P01568 189 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 ZNF880Q6PDB4 577 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 NARS2Q96I59 477 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 OR10C1Q96KK4 312 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 NAA60Q9H7X0 242 aa18.42■□□□□ 0.54
PDLIM2-216ENST00000464275 M0R1B8 84 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 DNASE2O00115 360 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 TK1P04183 234 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 SCTP09683 121 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 RAB32Q13637 225 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 SMCO1Q147U7 214 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 ZNF146Q15072 292 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 SPIN3Q5JUX0 258 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 SHEQ5VZ18 495 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 FIP1L1Q6UN15 594 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 SYT3Q9BQG1 590 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 TREM2Q9NZC2 230 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 OR5AC2Q9NZP5 309 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 LPAR3Q9UBY5 353 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 TUBD1Q9UJT1 453 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 FZR1Q9UM11 496 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 A8MXE2 369 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 C3orf80F5H4A9 247 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 SH2D1BO14796 132 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 C10orf91Q5T1B1 145 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 GFRALQ6UXV0 394 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms