RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ATG12O94817 140 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 ID4P47928 161 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 PCSK4Q6UW60 755 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 LINC00596Q86U02 117 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 ZNF695Q8IW36 515 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 DMBX1Q8NFW5 382 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 OR4D5Q8NGN0 318 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 SAT2Q96F10 170 aaPredicted RBP17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 PARP12Q9H0J9 701 aaKnown RBP17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 TREM1Q9NP99 234 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 FAM96BQ9Y3D0 163 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 PRR14LQ5THK1 2151 aa17.34■□□□□ 0.37
TUBGCP3-204ENST00000464139 DEGS1O15121 323 aa17.33■□□□□ 0.37
TUBGCP3-204ENST00000464139 IGHG3P01860 377 aa17.33■□□□□ 0.37
TUBGCP3-204ENST00000464139 NHLH2Q02577 135 aa17.33■□□□□ 0.37
TUBGCP3-204ENST00000464139 TGFBR3Q03167 851 aa17.33■□□□□ 0.37
TUBGCP3-204ENST00000464139 PJVKQ0ZLH3 352 aa17.33■□□□□ 0.37
TUBGCP3-204ENST00000464139 TSNAXQ99598 290 aaKnown RBP17.33■□□□□ 0.37
TUBGCP3-204ENST00000464139 FAM74A7A6NL05 159 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 DNASE2O00115 360 aaPredicted RBP17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 GPR137BO60478 399 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 SULT1A2P50226 295 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 IL13RA2Q14627 380 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 GUCA2BQ16661 112 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 FAM74A3Q4VXF1 159 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 FAM214BQ7L5A3 538 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 SELENOHQ8IZQ5 122 aaKnown RBP17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 SCCPDHQ8NBX0 429 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 SLC25A40Q8TBP6 338 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 RTL8AQ9BWD3 113 aa17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 NKX6-2Q9C056 277 aaPredicted RBP17.33■□□□□ 0.36
TUBGCP3-204ENST00000464139 RND3P61587 244 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 MRPL49Q13405 166 aaKnown RBP17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 TMEM56Q96MV1 263 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 RIMS4Q9H426 269 aaPredicted RBP17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 TMEM56-RWDD3S4R434 201 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 RIF1Q5UIP0 2472 aaKnown RBP17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 SIRPB1O00241 398 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 AGPAT2O15120 278 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 CTXN2P0C2S0 81 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 SELEP16581 610 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 ASCL1P50553 236 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 GABRA6Q16445 453 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 Q6P435 159 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 IL34Q6ZMJ4 242 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 UBAC2Q8NBM4 344 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 LILRB1Q8NHL6 650 aaPredicted RBP17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 ADAT1Q9BUB4 502 aaKnown RBP17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 RHOFQ9HBH0 211 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 POMT1Q9Y6A1 747 aa17.32■□□□□ 0.36
TUBGCP3-204ENST00000464139 P2RY1P47900 373 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 SRPXP78539 464 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 IL1F10Q8WWZ1 152 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 GTF3AQ92664 365 aaKnown RBP17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 KIRREL1Q96J84 757 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 ZFP57Q9NU63 452 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 NUDT19A8MXV4 375 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 F8W036 122 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 CDIPTO14735 213 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 AGFG2O95081 481 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 BLOC1S1P78537 153 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 SMUG1Q53HV7 270 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 VWA1Q6PCB0 445 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 OR1J1Q8NGS3 322 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 GLRX2Q9NS18 164 aa17.31■□□□□ 0.36
TUBGCP3-204ENST00000464139 H0YL77 283 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 ADAM20O43506 726 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 POLR2GP62487 172 aaKnown RBP eCLIP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 GPR157Q5UAW9 335 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 Q6ZRG5 221 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 Q6ZT83 130 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 PUSL1Q8N0Z8 303 aaKnown RBP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 OR10J5Q8NHC4 309 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 MAGT1Q9H0U3 335 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 TRBV6-6A0A0A6YYG2 114 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 LRP5LA4QPB2 252 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 CDS2O95674 445 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 F12P00748 615 aaPredicted RBP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 MUC1P15941 1255 aaPredicted RBP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 UCP2P55851 309 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 HLA-DRB3P79483 266 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 GNMTQ14749 295 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 ZNF169Q14929 603 aaPredicted RBP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 ZNF324BQ6AW86 544 aaPredicted RBP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 PRR18Q8N4B5 295 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 C9orf106Q8NAJ2 232 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 UBALD1Q8TB05 177 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 TLNRD1Q9H1K6 362 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 UQCC1Q9NVA1 299 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 OR1A1Q9P1Q5 309 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 ERRFI1Q9UJM3 462 aaPredicted RBP17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 BOD1L1Q8NFC6 3051 aa17.3■□□□□ 0.36
TUBGCP3-204ENST00000464139 PGLYRP1O75594 196 aaPredicted RBP17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 OR2H2O95918 312 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 GRPP07492 148 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 NKX2-1P43699 371 aaPredicted RBP17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 PSG7Q13046 419 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 ZNF154Q13106 437 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 FAM76BQ5HYJ3 339 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 CXorf66Q5JRM2 361 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms