RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 IGHV1-8P0DP01 117 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 GZMHP20718 246 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 CHATP28329 748 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 RPL5P46777 297 aaKnown RBP16.22■□□□□ 0.19
COL9A3-204ENST00000463487 ALDH3B2P48448 385 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 DLX6P56179 175 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 TRAT1Q6PIZ9 186 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 BRICD5Q6PL45 260 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 ZNF497Q6ZNH5 498 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 TCF23Q7RTU1 214 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 NR2C2APQ86WQ0 139 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 ANKRD13BQ86YJ7 626 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 JMJD8Q96S16 334 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 NICN1Q9BSH3 213 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 ZNF69Q9UC07 566 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 TRAPPC2LQ9UL33 140 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 SESN1Q9Y6P5 492 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 DSCAML1Q8TD84 2053 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 UBE2QL1A1L167 161 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 LDLRAD4O15165 306 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 TCF21O43680 179 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 NOL3O60936 208 aaKnown RBP16.21■□□□□ 0.19
COL9A3-204ENST00000463487 SCGNO76038 276 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 SLC2A2P11168 524 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-204ENST00000463487 C6orf183Q5T699 404 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 IDNKQ5T6J7 187 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 GPR107Q5VW38 600 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 SIGIRRQ6IA17 410 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 HEPN1Q6WQI6 88 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 BRD3OSQ6XYD6 125 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 FAM89BQ8N5H3 189 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 HSF4Q9ULV5 492 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 ETV7Q9Y603 341 aa16.21■□□□□ 0.19
COL9A3-204ENST00000463487 KBTBD11-OT1A0A1B0GTJ5 212 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 RNASEK-C17orf49H0YIS7 233 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 GABARAPO95166 117 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 CDK2P24941 298 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 SERPINB10P48595 397 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 VEGFCP49767 419 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 MRPS15P82914 257 aaKnown RBP16.2■□□□□ 0.18
COL9A3-204ENST00000463487 ARL6IP1Q15041 203 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 MIDNQ504T8 468 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 ZNF782Q6ZMW2 699 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-204ENST00000463487 C6orf201Q7Z4U5 140 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 PDZD9Q8IXQ8 264 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 MRGPRDQ8TDS7 321 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 C22orf15Q8WYQ4 148 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 TNFRSF14Q92956 283 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 PHF21AQ96BD5 680 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 SLC6A7Q99884 636 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 RIMS4Q9H426 269 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-204ENST00000463487 CALYQ9NYX4 217 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 FAM96BQ9Y3D0 163 aa16.2■□□□□ 0.18
COL9A3-204ENST00000463487 NPFFO15130 113 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 SOCS1O15524 211 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 MT-ND4P03905 459 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 CLEC2LP0C7M8 214 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 LGALS4P56470 323 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 VBP1P61758 197 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 NCS1P62166 190 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 KLRD1Q13241 179 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 Q6ZTK2 550 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 USP43Q70EL4 1123 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 C11orf42Q8N5U0 333 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 OR10A7Q8NGE5 316 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 OR13A1Q8NGR1 328 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 ATG5Q9H1Y0 275 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 TMEM133Q9H2Q1 129 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 CHMP1AQ9HD42 196 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-204ENST00000463487 KCNIP1Q9NZI2 227 aa16.19■□□□□ 0.18
COL9A3-204ENST00000463487 C2CD3Q4AC94 2353 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 A0A0B4J203 849 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 ORC5O43913 435 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 PAHP00439 452 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 COX7A1P24310 79 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 TMEM30BQ3MIR4 351 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 PRAMEF5Q5TYX0 476 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 RUSC1-AS1Q66K80 236 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 ZNF554Q86TJ5 538 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 RTN4RL2Q86UN3 420 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 GAPTQ8N292 157 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 LGALS14Q8TCE9 139 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 ZDHHC16Q969W1 377 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 RAB3CQ96E17 227 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 SULT4A1Q9BR01 284 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 FAAP24Q9BTP7 215 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 CLEC7AQ9BXN2 247 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 ABRACLQ9P1F3 81 aa16.18■□□□□ 0.18
COL9A3-204ENST00000463487 A0A0A6YYD4 124 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 MEIOCA2RUB1 952 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 SPINT2O43291 252 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 FBP1P09467 338 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 SNRPBP14678 240 aaKnown RBP16.17■□□□□ 0.18
COL9A3-204ENST00000463487 RPS19P39019 145 aaKnown RBP16.17■□□□□ 0.18
COL9A3-204ENST00000463487 DYNC1I2Q13409 638 aaKnown RBP16.17■□□□□ 0.18
COL9A3-204ENST00000463487 SLC16A12Q6ZSM3 486 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 PNKDQ8N490 385 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 OR10R2Q8NGX6 335 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 OR4K15Q8NH41 348 aa16.17■□□□□ 0.18
COL9A3-204ENST00000463487 RAB2BQ8WUD1 216 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms