RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 DUSP21Q9H596 190 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-202ENST00000463440 TCF7L1Q9HCS4 588 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 CALYQ9NYX4 217 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 DPM3Q9P2X0 92 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 FBLN5Q9UBX5 448 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 TCF19Q9Y242 345 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 A0A087X0M5 115 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 A0A1B0GX30 115 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 A0A1W2PP11 408 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 FAM172BPA6NC97 362 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 H3BUI4 141 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 F2RL2O00254 374 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 CGB3P0DN86 165 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 CGB7P0DN87 165 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 NFYBP25208 207 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 GDNFP39905 211 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 OR13A1Q8NGR1 328 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 UFD1Q92890 307 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 UQCC2Q9BRT2 126 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 ZNF286AQ9HBT8 521 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 SPACA1Q9HBV2 294 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 NBEAL1Q6ZS30 2694 aa13.1□□□□□ -0.31
COL1A1-202ENST00000463440 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 A6NDX4 124 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 LEUTXA8MZ59 168 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 TIMM23O14925 209 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 CHST1O43916 411 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 IL1AP01583 271 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 IGLV1-47P01700 117 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 CRHBPP24387 322 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 CEACAM3P40198 252 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 KIR2DS4P43632 304 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 INSL4Q14641 139 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 C11orf88Q6PI97 169 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 OR2T6Q8NHC8 308 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 MRGPRDQ8TDS7 321 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 CCDC90BQ9GZT6 254 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 LINC00574Q9H8X3 128 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 IDI2-AS1Q9NZ38 188 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 ZNF581Q9P0T4 197 aa13.09□□□□□ -0.31
COL1A1-202ENST00000463440 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 GZMHP20718 246 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 BRS3P32247 399 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 KRTAP10-3P60369 221 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 RBM39Q14498 530 aaKnown RBP13.08□□□□□ -0.32
COL1A1-202ENST00000463440 HLA-DRB5Q30154 266 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 LIPKQ5VXJ0 399 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 PRSS48Q7RTY5 328 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 LYPD6Q86Y78 171 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 OR10A7Q8NGE5 316 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 OR9G1Q8NH87 305 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 PHYHIPQ92561 330 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 CNBD2Q96M20 576 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 ISYNA1Q9NPH2 558 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 GHRLQ9UBU3 117 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 BLOC1S6Q9UL45 172 aa13.08□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 MCRIP1C9JLW8 97 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 NPIPB11E5RHQ5 1161 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 BUB1B-PAK6H3BSN5 160 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 CRTAPO75718 401 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-202ENST00000463440 ATP6V1G2O95670 118 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A15PP0C7V4 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A13PP0C7W8 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A14PP0C7W9 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM90A24PP0C7X0 464 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 MGMTP16455 207 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 HSD17B12Q53GQ0 312 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
COL1A1-202ENST00000463440 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 GLT8D1Q68CQ7 371 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 CCBE1Q6UXH8 406 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-202ENST00000463440 TMEM219Q86XT9 240 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 SELENOIQ9C0D9 397 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 BANF2Q9H503 90 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 RAB26Q9ULW5 256 aa13.07□□□□□ -0.32
COL1A1-202ENST00000463440 AMMECR1Q9Y4X0 333 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-202ENST00000463440 TRAV39A0A0B4J263 110 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 OOSP1A8MZH6 123 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 M0QZ24 198 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 SC5DO75845 299 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 UBBP0CG47 229 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 JUNBP17275 347 aaPredicted RBP13.06□□□□□ -0.32
COL1A1-202ENST00000463440 SRMP19623 302 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms